RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PGDP52209 483 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 RPS15P62841 145 aaKnown RBP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 BCL7AQ4VC05 210 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 DENND5AQ6IQ26 1287 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 JMJD6Q6NYC1 403 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 CFAP206Q8IYR0 622 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 KRT35Q92764 455 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 LINC00615Q96LM1 132 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 LRFN5Q96NI6 719 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 QKIQ96PU8 341 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 FAM60AQ9NP50 221 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 ABHD10Q9NUJ1 306 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 DDX56Q9NY93 547 aaKnown RBP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 KLHL8Q9P2G9 620 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-202ENST00000509637 LCMT1Q9UIC8 334 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 TCFL5Q9UL49 500 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.47■□□□□ 0.075e-6■■■■□ 23
RAB40C-202ENST00000509637 ALG6Q9Y672 507 aa15.47■□□□□ 0.07
RAB40C-202ENST00000509637 A6NL46 340 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 BTN3A1O00481 513 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 STX7O15400 261 aaKnown RBP15.46■□□□□ 0.07
RAB40C-202ENST00000509637 CNOT3O75175 753 aaKnown RBP15.46■□□□□ 0.07
RAB40C-202ENST00000509637 VPS4BO75351 444 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 SRP72O76094 671 aaKnown RBP15.46■□□□□ 0.07
RAB40C-202ENST00000509637 AGFG2O95081 481 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 TPBGLP0DKB5 382 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 HLA-DPA1P20036 260 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 MSH3P20585 1137 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 GABRA4P48169 554 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 LMAN1P49257 510 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 MPP3Q13368 585 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 ZIC1Q15915 447 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 FHL5Q5TD97 284 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 SLC6A19Q695T7 634 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 OOSP2Q86WS3 158 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 TCTN2Q96GX1 697 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 HEMGNQ9BXL5 484 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 NLNQ9BYT8 704 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 OR52A5Q9H2C5 316 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 XKR8Q9H6D3 395 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 ASB8Q9H765 288 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 ACSS2Q9NR19 701 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 HACD3Q9P035 362 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 VPS4AQ9UN37 437 aa15.46■□□□□ 0.07
RAB40C-202ENST00000509637 SNRNP200O75643 2136 aaKnown RBP15.46■□□□□ 0.06
RAB40C-202ENST00000509637 UNC79Q9P2D8 2635 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 A1L4Q6 167 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 KLF7O75840 302 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-202ENST00000509637 TMEM63AO94886 807 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 RAB40ALP0C0E4 278 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 PRDX3P30048 256 aaKnown RBP15.45■□□□□ 0.06
RAB40C-202ENST00000509637 AKT1P31749 480 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 SLC1A1P43005 524 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ARL4DP49703 201 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 TMPRSS15P98073 1019 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 RAPSNQ13702 412 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ATP1A4Q13733 1029 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ITGA9Q13797 1035 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 LONRF2Q1L5Z9 754 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 PLEKHN1Q494U1 663 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ZDHHC20Q5W0Z9 365 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 KLHL35Q6PF15 583 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 CDHR3Q6ZTQ4 885 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 RHOT2Q8IXI1 618 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ADGRF3Q8IZF5 1079 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 GLIS1Q8NBF1 620 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 SSC4DQ8WTU2 575 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ZFPM2Q8WW38 1151 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 INPP5DQ92835 1189 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 TRAPPC9Q96Q05 1148 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 RANBP9Q96S59 729 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 FAM118BQ9BPY3 351 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 ACSL5Q9ULC5 683 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 PKP3Q9Y446 797 aa15.45■□□□□ 0.06
RAB40C-202ENST00000509637 TMEM150CB9EJG8 249 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 MFAP3LO75121 409 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 CLDN1O95832 211 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 CBSLP0DN79 551 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 CBSP35520 551 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 PRLHRP49683 370 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 ZNF140P52738 457 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-202ENST00000509637 TFDP2Q14188 446 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 SPARCL1Q14515 664 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 TAF1AQ15573 450 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-202ENST00000509637 CRB2Q5IJ48 1285 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 TRIM73Q86UV7 250 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 VSTM4Q8IW00 320 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 SYTL1Q8IYJ3 562 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 FLVCR1-AS1Q8TAF5 88 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 P3H4Q92791 437 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 PITPNM3Q9BZ71 974 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 ZCCHC2Q9C0B9 1178 aaKnown RBP15.44■□□□□ 0.06
RAB40C-202ENST00000509637 GBA3Q9H227 469 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 DEF6Q9H4E7 631 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 C1GALT1Q9NS00 363 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 SOHLH2Q9NX45 425 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB40C-202ENST00000509637 RSPH14Q9UHP6 348 aa15.44■□□□□ 0.06
RAB40C-202ENST00000509637 ANKRD12Q6UB98 2062 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms