RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 RAD9AQ99638 391 aa16.68■□□□□ 0.26
LIN54-204ENST00000505397 ACTL8Q9H568 366 aa16.68■□□□□ 0.26
LIN54-204ENST00000505397 NTN4Q9HB63 628 aa16.68■□□□□ 0.26
LIN54-204ENST00000505397 STOML2Q9UJZ1 356 aa16.68■□□□□ 0.26
LIN54-204ENST00000505397 UPK1AO00322 258 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 SYNCRIPO60506 623 aaKnown RBP16.67■□□□□ 0.26
LIN54-204ENST00000505397 OLFM2O95897 454 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 GLUD1P00367 558 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 CDH1P12830 882 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 MC4RP32245 332 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 STT3AP46977 705 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 TGFBIQ15582 683 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 ATP6AP1LQ52LC2 224 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 SLC2A7Q6PXP3 512 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 CROCCP3Q8IVE0 287 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 OFCC1Q8IZS5 231 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 FNDC5Q8NAU1 212 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 HJURPQ8NCD3 748 aaPredicted RBP16.67■□□□□ 0.26
LIN54-204ENST00000505397 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 FKBPLQ9UIM3 349 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 MAGEL2Q9UJ55 1249 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 LAMA2P24043 3122 aaKnown RBP16.67■□□□□ 0.26
LIN54-204ENST00000505397 H7C0S8 307 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 ANKRD28O15084 1053 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 TBL1XO60907 577 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 RAB39AQ14964 217 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 RNF219Q5W0B1 726 aaPredicted RBP16.67■□□□□ 0.26
LIN54-204ENST00000505397 GLYATQ6IB77 296 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 LETMD1Q6P1Q0 360 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 CDYL2Q8N8U2 506 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 COMMD10Q9Y6G5 202 aa16.67■□□□□ 0.26
LIN54-204ENST00000505397 GIPC1O14908 333 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 HLCSP50747 726 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 GALK1P51570 392 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PCBP2Q15366 365 aaKnown RBP eCLIP16.66■□□□□ 0.266e-23■■■■■ 47.5
LIN54-204ENST00000505397 TMEM240Q5SV17 173 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 KLHL35Q6PF15 583 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CPNE9Q8IYJ1 553 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PDPRQ8NCN5 879 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PDLIM5Q96HC4 596 aaKnown RBP16.66■□□□□ 0.26
LIN54-204ENST00000505397 EXOC2Q96KP1 924 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CNDP2Q96KP4 475 aaKnown RBP16.66■□□□□ 0.26
LIN54-204ENST00000505397 SCUBE2Q9NQ36 999 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 NUDT4Q9NZJ9 180 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CD274Q9NZQ7 290 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 H3BMQ9 156 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PFDN6O15212 129 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 TULP3O75386 442 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 ATE1O95260 518 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CASP2P42575 452 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CLCN7P51798 805 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CBX2Q14781 532 aaPredicted RBP16.66■□□□□ 0.26
LIN54-204ENST00000505397 CCNYL2Q5T2Q4 361 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 LILRA6Q6PI73 481 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 ELMSAN1Q6PJG2 1045 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 GAREM2Q75VX8 874 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 HS6ST3Q8IZP7 471 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
LIN54-204ENST00000505397 NSMCE2Q96MF7 247 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 COG8Q96MW5 612 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 CDK15Q96Q40 435 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 SEPHS2Q99611 448 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 P2RY12Q9H244 342 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PLGRKTQ9HBL7 147 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 ASAH2Q9NR71 780 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 PCDHGA11Q9Y5H2 935 aa16.66■□□□□ 0.26
LIN54-204ENST00000505397 ANKRD66B4E2M5 251 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 IFRD1O00458 451 aaPredicted RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 LSM1O15116 133 aaKnown RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 EN2P19622 333 aaPredicted RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 CDH18Q13634 790 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 CXorf57Q6NSI4 855 aaKnown RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 ZNF783Q6ZMS7 281 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 TTC30BQ8N4P2 665 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 DTWD1Q8N5C7 304 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 TERB1Q8NA31 727 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 LPCAT1Q8NF37 534 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 FNDC8Q8TC99 324 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 RNF145Q96MT1 663 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 TUBA1CQ9BQE3 449 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 SOX17Q9H6I2 414 aaPredicted RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 RAI2Q9Y5P3 530 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 MTCL1Q9Y4B5 1905 aaKnown RBP16.65■□□□□ 0.26
LIN54-204ENST00000505397 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 CPNE6O95741 557 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 ESR1P03372 595 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 PTGER3P43115 390 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 GRSF1Q12849 480 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIN54-204ENST00000505397 SELPLGQ14242 412 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 KIAA0040Q15053 153 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 TMC8Q8IU68 726 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 VPS50Q96JG6 964 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 CORO1BQ9BR76 489 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 PCDHGC4Q9Y5F7 938 aa16.65■□□□□ 0.26
LIN54-204ENST00000505397 IRAK3Q9Y616 596 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms