RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 AGAP9Q5VTM2 703 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 SH2D5Q6ZV89 423 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 CLEC14AQ86T13 490 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 PDZD3Q86UT5 571 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 EXOC3L1Q86VI1 746 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 GKN2Q86XP6 184 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 CENPLQ8N0S6 344 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-230ENST00000491028 ZNF548Q8NEK5 533 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-230ENST00000491028 CCL4L1Q8NHW4 92 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 LMX1AQ8TE12 382 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 EEF1AKMT1Q8WVE0 214 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 ANKRD49Q8WVL7 239 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 ZBTB9Q96C00 473 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 TLCD1Q96CP7 247 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 ATP6V1G3Q96LB4 118 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 TSNARE1Q96NA8 513 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 SMC6Q96SB8 1091 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 DERL2Q9GZP9 239 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 OR52A5Q9H2C5 316 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 PCOLCE2Q9UKZ9 415 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 ST14Q9Y5Y6 855 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 CSNK1G3Q9Y6M4 447 aa18.24■□□□□ 0.51
MCF2L-230ENST00000491028 CCDC189A1A4V9 331 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 FOXO6A8MYZ6 492 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-230ENST00000491028 GOLGA8RI6L899 631 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 AQP9O43315 295 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 LRP3O75074 770 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 GLRA3O75311 464 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 KLHL2O95198 593 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 SLC2A4P14672 509 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 EPHA8P29322 1005 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-230ENST00000491028 KPNA2P52292 529 aaKnown RBP18.23■□□□□ 0.51
MCF2L-230ENST00000491028 IRF9Q00978 393 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 FAM83EQ2M2I3 478 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 HLA-BQ31612 363 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 SLC30A9Q6PML9 568 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 TAF8Q7Z7C8 310 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 VRK3Q8IV63 474 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 C4orf33Q8N1A6 199 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 APOPT1Q96IL0 206 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 NMRAL1Q9HBL8 299 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 SSU72Q9NP77 194 aaKnown RBP18.23■□□□□ 0.51
MCF2L-230ENST00000491028 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 NOVA2Q9UNW9 492 aaKnown RBP18.23■□□□□ 0.51
MCF2L-230ENST00000491028 SDK1Q7Z5N4 2213 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 ADAMTS9Q9P2N4 1935 aa18.23■□□□□ 0.51
MCF2L-230ENST00000491028 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 PDZK1P1A8MUH7 402 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 IFRD1O00458 451 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-230ENST00000491028 COPEO14579 308 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 LMNAP02545 664 aaKnown RBP18.22■□□□□ 0.51
MCF2L-230ENST00000491028 ZNF806P0C7X5 589 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 CD1DP15813 335 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 PDHA2P29803 388 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 HALP42357 657 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 CCT8P50990 548 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 SP140Q13342 867 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 C1orf61Q13536 156 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 CSHL1Q14406 222 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 SHBQ15464 509 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 UAP1L1Q3KQV9 507 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 HSP90B2PQ58FF3 399 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 PRAMEF14Q5SWL7 426 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 KLC3Q6P597 504 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 LVRNQ6Q4G3 990 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 ABRAXAS1Q6UWZ7 409 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
MCF2L-230ENST00000491028 KCTD4Q8WVF5 259 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 FOPNLQ96NB1 174 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 WWP1Q9H0M0 922 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 GAREM1Q9H706 876 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 FSCN3Q9NQT6 498 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 IGSF5Q9NSI5 407 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 FAM86C1Q9NVL1 165 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 TAAR2Q9P1P5 351 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 TBC1D29Q9UFV1 150 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 DCDC2Q9UHG0 476 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 DOLKQ9UPQ8 538 aa18.22■□□□□ 0.51
MCF2L-230ENST00000491028 TDRD6O60522 2096 aaKnown RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 A6NCN8 305 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 LMO7DNF2Z398 122 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 MATN4O95460 622 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 CELA2BP08218 269 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 F3P13726 295 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 ENGP17813 658 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 RPL10P27635 214 aaKnown RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 ACADLP28330 430 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 CCT5P48643 541 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 IRX4P78413 519 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 DLG1Q12959 904 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 ACAP2Q15057 778 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 CCDC6Q16204 474 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 TTMPQ5BVD1 217 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 CAPRIN2Q6IMN6 1127 aaKnown RBP18.21■□□□□ 0.51
MCF2L-230ENST00000491028 UNC5DQ6UXZ4 953 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 CYHR1Q6ZMK1 362 aa18.21■□□□□ 0.51
MCF2L-230ENST00000491028 BANPQ8N9N5 519 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms