RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 USP1O94782 785 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CSF2RBP32927 897 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 PREPP48147 710 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CD151P48509 253 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 ITGA8P53708 1063 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CFHR1Q03591 330 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 LONRF1Q17RB8 773 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 BBS9Q3SYG4 887 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 SYTL3Q4VX76 610 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 KLHL35Q6PF15 583 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 FOXR1Q6PIV2 292 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 XKR5Q6UX68 686 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 PDIK1LQ8N165 341 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 AGGF1Q8N302 714 aaeCLIP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CCDC74BQ96LY2 380 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 RMDN2Q96LZ7 410 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 SLC46A1Q96NT5 459 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 FERD3LQ96RJ6 166 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CARD6Q9BX69 1037 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 PDP2Q9P2J9 529 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 GNPTGQ9UJJ9 305 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 CDC23Q9UJX2 597 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 ZMIZ1Q9ULJ6 1067 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 ZCWPW2A0A1B0GU75 182 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 UBA6A0AVT1 1052 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 H3BMM5 538 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 SEC31AO94979 1220 aaKnown RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TNFSF15O95150 251 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TTC4O95801 387 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 APOA4P06727 396 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 JMJD7P0C870 316 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ITGB6P18564 788 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PGAM1P18669 254 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 OGNP20774 298 aaKnown RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 RPS3P23396 243 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 MPSTP25325 297 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PDHA2P29803 388 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 CSTF2P33240 577 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ARL4CP56559 192 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ERVPABLB-1P60509 514 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 DHX9Q08211 1270 aaKnown RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 C2orf54Q08AI8 447 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 BRD3Q15059 726 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PLCL1Q15111 1095 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 HIF1AQ16665 826 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TBC1D25Q3MII6 688 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 IGF2-ASQ6U949 168 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PDZD3Q86UT5 571 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PROSER1Q86XN7 944 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 CILP2Q8IUL8 1156 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 AGBL5Q8NDL9 886 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 GABPB2Q8TAK5 448 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 CALML6Q8TD86 181 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ASZ1Q8WWH4 475 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 FGF11Q92914 225 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ZDHHC12Q96GR4 267 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 PANX3Q96QZ0 392 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 EBNA1BP2Q99848 306 aaKnown RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 ERP44Q9BS26 406 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 P2RY12Q9H244 342 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 MVB12BQ9H7P6 319 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 THSD1Q9NS62 852 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 C20orf96Q9NUD7 363 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 INTS10Q9NVR2 710 aaKnown RBP12.15□□□□□ -0.46
HMG20B-211ENST00000486028 OGFRQ9NZT2 677 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 TMEM9Q9P0T7 183 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 SNX24Q9Y343 169 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 LOXL2Q9Y4K0 774 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 FAM169AQ9Y6X4 670 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 FREM2Q5SZK8 3169 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 DMXL2Q8TDJ6 3036 aa12.15□□□□□ -0.46
HMG20B-211ENST00000486028 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 PIKFYVEQ9Y2I7 2098 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 SLC5A10A0PJK1 596 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 IQCF5A8MTL0 148 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 KPNA5O15131 536 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ESR1P03372 595 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 THRAP10827 490 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 CCR7P32248 378 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 RPL21P46778 160 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 ADARP55265 1226 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 EIF3BP55884 814 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 MRPS25P82663 173 aaKnown RBP12.14□□□□□ -0.47
HMG20B-211ENST00000486028 CALCOCO2Q13137 446 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 TUBB2AQ13885 445 aa12.14□□□□□ -0.47
HMG20B-211ENST00000486028 BOP1Q14137 746 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms