RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 APOL6Q9BWW8 343 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 UBA5Q9GZZ9 404 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 C8orf33Q9H7E9 229 aaPredicted RBP4.69□□□□□ -1.66
VPS50-214ENST00000477935 LUZP4Q9P127 313 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 IFT80Q9P2H3 777 aaPredicted RBP4.69□□□□□ -1.66
VPS50-214ENST00000477935 PIAS3Q9Y6X2 628 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 GREB1Q4ZG55 1949 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 CACNA1EQ15878 2313 aa4.69□□□□□ -1.66
VPS50-214ENST00000477935 PTPRQQ9UMZ3 2332 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 DOCK8Q8NF50 2099 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 C17orf113A0A1B0GUU1 675 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 SPAARA0A1B0GVQ0 90 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CEP104O60308 925 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 PRSS2P07478 247 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 PCP11498 1178 aaKnown RBP4.68□□□□□ -1.66
VPS50-214ENST00000477935 HSD3B1P14060 373 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 PSMC3P17980 439 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 TTKP33981 857 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CCR10P46092 362 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CSRP3P50461 194 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CCR5P51681 352 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 DSCR9P59020 149 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 FAM27E3Q08E93 113 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CAPSQ13938 189 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 NAA25Q14CX7 972 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 QRICH1Q2TAL8 776 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 ASPRV1Q53RT3 343 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 LIN9Q5TKA1 542 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 ATG16L1Q676U5 607 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 ZNF324BQ6AW86 544 aaPredicted RBP4.68□□□□□ -1.66
VPS50-214ENST00000477935 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.68□□□□□ -1.66
VPS50-214ENST00000477935 CHD1LQ86WJ1 897 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CPXM2Q8N436 756 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 HDDC3Q8N4P3 179 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 OR14A16Q8NHC5 309 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 RFWD2Q8NHY2 731 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 URGCPQ8TCY9 931 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 NUDCD2Q8WVJ2 157 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 RNF183Q96D59 192 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 MBOAT7Q96N66 472 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 PRORYQ9H606 182 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 ZFP14Q9HCL3 533 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 ZNF334Q9HCZ1 680 aaPredicted RBP4.68□□□□□ -1.66
VPS50-214ENST00000477935 IL1RAPL2Q9NP60 686 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 CD93Q9NPY3 652 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 TBC1D13Q9NVG8 400 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS50-214ENST00000477935 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
VPS50-214ENST00000477935 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 COL1A2P08123 1366 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 IGHV4-28A0A0C4DH34 117 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 E9PAM4 449 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 GOLGA8HP0CJ92 632 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 CCNE1P24864 410 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 TMOD1P28289 359 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 HOXA13P31271 388 aaPredicted RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 SLC11A1P49279 550 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 BLKP51451 505 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 RIPPLY3P57055 190 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 IRX4P78413 519 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 ADORA2A-AS1P86434 159 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 CTTNQ14247 550 aaKnown RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 ASIC2Q16515 512 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 EDRF1Q3B7T1 1238 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 USP41Q3LFD5 358 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 PPM1LQ5SGD2 360 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 ADGRG6Q86SQ4 1221 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 LRRTM4Q86VH4 590 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 FJX1Q86VR8 437 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 MON1AQ86VX9 555 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 RALGPS2Q86X27 583 aaPredicted RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 DENND6AQ8IWF6 608 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 KBTBD3Q8NAB2 608 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 MYRIPQ8NFW9 859 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 ITFG1Q8TB96 612 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 DEPDC1BQ8WUY9 529 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 PI4K2AQ9BTU6 479 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 NUSAP1Q9BXS6 441 aaKnown RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 PLA2G2FQ9BZM2 168 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 SLCO5A1Q9H2Y9 848 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 JMJD4Q9H9V9 463 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 CLK4Q9HAZ1 481 aaKnown RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 VAT1LQ9HCJ6 419 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 SPATS2LQ9NUQ6 558 aaKnown RBP4.67□□□□□ -1.66
VPS50-214ENST00000477935 EXOC6BQ9Y2D4 811 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 FRMPD4Q14CM0 1322 aa4.67□□□□□ -1.66
VPS50-214ENST00000477935 COL12A1Q99715 3063 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 LOXHD1Q8IVV2 1947 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 PABPN1LA6NDY0 278 aaKnown RBP4.66□□□□□ -1.66
VPS50-214ENST00000477935 CBY3A6NI87 242 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 EBAG9O00559 213 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 ZNF197O14709 1029 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 ZNF263O14978 683 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 ZBTB5O15062 677 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 MAGEB2O15479 319 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 ATP9AO75110 1047 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 CBSLP0DN79 551 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 GDI1P31150 447 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 CBSP35520 551 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 CCT5P48643 541 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms