RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TUBB4BP68371 445 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 COG7P83436 770 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MAT1AQ00266 395 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 PDE1BQ01064 536 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 KIF5AQ12840 1032 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MYBPHQ13203 477 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CALCRLQ16602 461 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MEP1BQ16820 701 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CAVIN1Q6NZI2 390 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 RHBDF2Q6PJF5 856 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MFSD6Q6ZSS7 791 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SPATA19Q7Z5L4 167 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MAP7D3Q8IWC1 876 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 RNF113BQ8IZP6 322 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CCAR2Q8N163 923 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 IQUBQ8NA54 791 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SMRP1Q8NCR6 262 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 C9orf43Q8TAL5 461 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 LNX1Q8TBB1 728 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 UBE2Q2Q8WVN8 375 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 EXT2Q93063 718 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLAMF9Q96A28 289 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SPSB1Q96BD6 273 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 VMP1Q96GC9 406 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 RMDN2Q96LZ7 410 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 C3orf30Q96M34 536 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF385AQ96PM9 386 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 FEVQ99581 238 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 GPATCH1Q9BRR8 931 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 DESI2Q9BSY9 194 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SEMA6AQ9H2E6 1030 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ARRDC1-AS1Q9H2J1 176 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 XAB2Q9HCS7 855 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 Q9N2K0 584 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MYNNQ9NPC7 610 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF701Q9NV72 531 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 OSER1Q9NX31 292 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ABT1Q9ULW3 272 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 OR2W1Q9Y3N9 320 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 GRIP1Q9Y3R0 1128 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SNX9Q9Y5X1 595 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CLASP1Q7Z460 1538 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 SNAPC4Q5SXM2 1469 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 KDM6BO15054 1643 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CGNL1Q0VF96 1302 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF521Q96K83 1311 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 EIF4G3O43432 1585 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TRAV34A0A0B4J273 112 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 C4orf47A7E2U8 309 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PRR32B1ATL7 298 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC30A4O14863 429 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC16A5O15375 505 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 GPR137BO60478 399 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PPP1R3DO95685 299 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PENKP01210 267 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CRYABP02511 175 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CSN3P07498 182 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ITGA2P17301 1181 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TIA1P31483 386 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 USP8P40818 1118 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMPOP42166 694 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TNNT3P45378 269 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ARCN1P48444 511 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 GMPSP49915 693 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ASCL1P50553 236 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLCD1P51178 756 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CLDN15P56746 228 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TUBA1BP68363 451 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 MRPS21P82921 87 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 RELQ04864 619 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLBD1Q6P4A8 553 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLXDC2Q6UX71 529 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PPP1R21Q6ZMI0 780 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ODF3L1Q8IXM7 274 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 ELP5Q8TE02 316 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMEM255BQ8WV15 326 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 SECISBP2LQ93073 1101 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 VOPP1Q96AW1 172 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PHF21AQ96BD5 680 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CPNE1Q99829 537 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CITED2Q99967 270 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLX1AQ9BQ83 275 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 LMF2Q9BU23 707 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 THUMPD3Q9BV44 507 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 CSTL1Q9H114 145 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 MRPL44Q9H9J2 332 aaKnown RBP3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 PFDN4Q9NQP4 134 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 TCP11L1Q9NUJ3 509 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 WNT16Q9UBV4 365 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 LRWD1Q9UFC0 647 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC24A2Q9UI40 661 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 RASAL2Q9UJF2 1139 aa3.01□□□□□ -1.93
HMGB1P27-201ENST00000431429 A0A0G2JNG1 304 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 A0A1W2PPK0 400 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 HTR3EA5X5Y0 456 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 NEMP2A6NFY4 417 aa3□□□□□ -1.93
HMGB1P27-201ENST00000431429 C5orf52A6NGY3 159 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms