RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ACVR1CQ8NER5 493 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 SIGLEC10Q96LC7 697 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 RMDN2Q96LZ7 410 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 FAM167BQ9BTA0 163 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 TRIM31Q9BZY9 425 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 RAB33BQ9H082 229 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 RAB17Q9H0T7 212 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 OR52A5Q9H2C5 316 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 TRIT1Q9H3H1 467 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 KIR3DX1Q9H7L2 352 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 INTS10Q9NVR2 710 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 MARCH4Q9P2E8 410 aaPredicted RBP14.36□□□□□ -0.11
CHD1-202ENST00000414220 PDP2Q9P2J9 529 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 POLG2Q9UHN1 485 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 CDC23Q9UJX2 597 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 ASF1AQ9Y294 204 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 FAM169AQ9Y6X4 670 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
CHD1-202ENST00000414220 A8MU76 341 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 E5RI56 91 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 MATN2O00339 956 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 CAPN5O15484 640 aaPredicted RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 MAP3K7O43318 606 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 RASSF9O75901 435 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ITGB6P18564 788 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 CHRM3P20309 590 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 MPSTP25325 297 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 CSF2RBP32927 897 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 ITGA8P53708 1063 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 MAPK10P53779 464 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ADARP55265 1226 aaKnown RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 BRD3Q15059 726 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 HIF1AQ16665 826 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 WHAMMP3Q1A5X7 153 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 TYSND1Q2T9J0 566 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 HIBCHQ6NVY1 386 aaPredicted RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 IRGCQ6NXR0 463 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 PDZD3Q86UT5 571 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 CILP2Q8IUL8 1156 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
CHD1-202ENST00000414220 LCN9Q8WX39 176 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 C9orf72Q96LT7 481 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 FOPNLQ96NB1 174 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 TGM7Q96PF1 710 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ERP44Q9BS26 406 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 TRIM51Q9BSJ1 452 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ASPSCR1Q9BZE9 553 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 B3GNT4Q9C0J1 378 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 SRMSQ9H3Y6 488 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 HRASLS2Q9NWW9 162 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 EPHA6Q9UF33 1036 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 KLHL3Q9UH77 587 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 SLC24A2Q9UI40 661 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 PCDHGA7Q9Y5G6 932 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 COMMD10Q9Y6G5 202 aa14.35□□□□□ -0.11
CHD1-202ENST00000414220 ZFC3H1O60293 1989 aaKnown RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 SLC5A10A0PJK1 596 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 GOLGA8KD6RF30 607 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 GOLGA8TH3BQL2 631 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 FANCGO15287 622 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 CAPNS1P04632 268 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 IVDP26440 423 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 CD82P27701 267 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 FMO4P31512 558 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 PREPP48147 710 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 ARL4DP49703 201 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 RAB15P59190 212 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 CFHR1Q03591 330 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 C2orf54Q08AI8 447 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 C16orf72Q14CZ0 275 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 KCNMB4Q86W47 210 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 FAM129CQ86XR2 697 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 RAB42Q8N4Z0 105 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 LILRA3Q8N6C8 439 aaPredicted RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 RCBTB1Q8NDN9 531 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 MNS1Q8NEH6 495 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 SNIP1Q8TAD8 396 aaKnown RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 FCRL3Q96P31 734 aaPredicted RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 TAAR9Q96RI9 348 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 CD180Q99467 661 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 P2RY12Q9H244 342 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 WHRNQ9P202 907 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 RAXQ9Y2V3 346 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 SNX24Q9Y343 169 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
CHD1-202ENST00000414220 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
CHD1-202ENST00000414220 UNC13CQ8NB66 2214 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 ZCWPW2A0A1B0GU75 182 aa14.33□□□□□ -0.12
CHD1-202ENST00000414220 EFCAB7A8K855 629 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms