RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SNAP47Q5SQN1 464 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-203ENST00000391855 SDCCAG8Q86SQ7 713 aaPredicted RBP12.37□□□□□ -0.43
GGPS1-203ENST00000391855 FAM129CQ86XR2 697 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 PPIL6Q8IXY8 311 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 NAT14Q8WUY8 206 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 ELMO1Q92556 727 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 UBXN4Q92575 508 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 PANX3Q96QZ0 392 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 ZNF768Q9H5H4 540 aaKnown RBP12.37□□□□□ -0.43
GGPS1-203ENST00000391855 SLC39A1Q9NY26 324 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 KLHL3Q9UH77 587 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 ASIC3Q9UHC3 531 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
GGPS1-203ENST00000391855 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 FAM237BA0A1B0GVD1 139 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 OR5K3A6NET4 321 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 SDR42E2A6NKP2 422 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 A8MU76 341 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 C9orf172C9J069 976 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 SMAPO00193 183 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 KLK10O43240 276 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 KDM1AO60341 852 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 NDUFS3O75489 264 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 FGF3P11487 239 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CCL4P13236 92 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 OGNP20774 298 aaKnown RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 RPS3P23396 243 aaKnown RBP eCLIP12.36□□□□□ -0.437e-7■■■■□ 25.3
GGPS1-203ENST00000391855 MC2RQ01718 297 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 PRKAA1Q13131 559 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 TMED2Q15363 201 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 DCAF12Q5T6F0 453 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 ANKRD22Q5VYY1 191 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 ARMC6Q6NXE6 501 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 IRGCQ6NXR0 463 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 DUS1LQ6P1R4 473 aaKnown RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 C19orf48Q6RUI8 117 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CEACAM20Q6UY09 585 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CAND1Q86VP6 1230 aaKnown RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 HOOK3Q86VS8 718 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 LMNTD2Q8IXW0 634 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 LILRA3Q8N6C8 439 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 OTUD6BQ8N6M0 293 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 ART4Q93070 314 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 MFSD3Q96ES6 412 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 TGM7Q96PF1 710 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 TCF12Q99081 682 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 DDX47Q9H0S4 455 aaKnown RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 FBXO8Q9NRD0 319 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 GNPTGQ9UJJ9 305 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 CFAP20Q9Y6A4 193 aaKnown RBP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 PRSS21Q9Y6M0 314 aa12.36□□□□□ -0.43
GGPS1-203ENST00000391855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
GGPS1-203ENST00000391855 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 SLC5A10A0PJK1 596 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 H3BMM5 538 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 DNALI1O14645 258 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 NDC80O14777 642 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 KPNA5O15131 536 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 RASSF9O75901 435 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 VAPBO95292 243 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 APOA4P06727 396 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 ITPKBP27987 946 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 MAGEA3P43357 314 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 CLN3Q13286 438 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 BOP1Q14137 746 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 SEMA3AQ14563 771 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 TYSND1Q2T9J0 566 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 PTRHD1Q6GMV3 140 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 ASZ1Q8WWH4 475 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 CAPZA3Q96KX2 299 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 FERD3LQ96RJ6 166 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 TFB2MQ9H5Q4 396 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 OCIAD1Q9NX40 245 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 SIDT1Q9NXL6 827 aaKnown RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-203ENST00000391855 POLG2Q9UHN1 485 aa12.35□□□□□ -0.43
GGPS1-203ENST00000391855 PIKFYVEQ9Y2I7 2098 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ANKRD11Q6UB99 2663 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-203ENST00000391855 OR1I1O60431 355 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 RPN2P04844 631 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 ARNTP27540 789 aa12.34□□□□□ -0.43
GGPS1-203ENST00000391855 PDHA2P29803 388 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms