RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 CD274Q9NZQ7 290 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 INVSQ9Y283 1065 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 NEUROG3Q9Y4Z2 214 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 A0A0U1RQS6 177 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 KPNA4O00629 521 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 E2F3O00716 465 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 GNGT2O14610 69 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 XPNPEP2O43895 674 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TBC1D4O60343 1298 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 KATNA1O75449 491 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 NDUFS3O75489 264 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 MLYCDO95822 493 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 CCL23P55773 120 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OXA1LQ15070 435 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 TYSND1Q2T9J0 566 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 CYP20A1Q6UW02 462 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 IL27RAQ6UWB1 636 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 LRRC8DQ7L1W4 858 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 MIB1Q86YT6 1006 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 DPP10Q8N608 796 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 ZNF555Q8NEP9 628 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OR4K2Q8NGD2 314 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OR56A4Q8NGH8 313 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 MUL1Q969V5 352 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SLC39A13Q96H72 371 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 MAGED4Q96JG8 741 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 NSMCE3Q96MG7 304 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 ADGRE2Q9UHX3 823 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 U3KQV3 271 aa13.9□□□□□ -0.18
CLCNKA-202ENST00000375692 DYTNA2CJ06 578 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 SYCE1LA8MT33 242 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 GSTA4O15217 222 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 CAPN1P07384 714 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 OGNP20774 298 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 GGT5P36269 586 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 MRPL19P49406 292 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 TMED10P49755 219 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 OCA2Q04671 838 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 PTPRRQ15256 657 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 RFTN2Q52LD8 501 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 DNAJC14Q6Y2X3 702 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 SLCO6A1Q86UG4 719 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 METTL6Q8TCB7 284 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 ZBED2Q9BTP6 218 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 THUMPD3Q9BV44 507 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 ALOXE3Q9BYJ1 711 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 POLR1EQ9GZS1 481 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 SARS2Q9NP81 518 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 ABI2Q9NYB9 513 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 MTRRQ9UBK8 725 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 ENPP5Q9UJA9 477 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 POLR3HQ9Y535 204 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 HS6ST1O60243 411 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 RAMP2O60895 175 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 JRKO75564 520 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 TSPAN12O95859 305 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 FGF1P05230 155 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 CNPP09543 421 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 PPP2R2BQ00005 443 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 NRG1Q02297 640 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 DNASE1L3Q13609 305 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 GPSM1Q86YR5 675 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 PIANPQ8IYJ0 282 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 CNIH3Q8TBE1 160 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 NODALQ96S42 347 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 MROQ9BYG7 248 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 DNAJB9Q9UBS3 223 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 FBXO10Q9UK96 956 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 SNX5Q9Y5X3 404 aa13.89□□□□□ -0.19
CLCNKA-202ENST00000375692 FAM92AA1XBS5 289 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 IQCF5A8MTL0 148 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 STX16O14662 325 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 B4GALT3O60512 393 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 TSPAN3O60637 253 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF623O75123 536 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 GMNNO75496 209 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PRKD3O94806 890 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 NPPAP01160 153 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 RPLP2P05387 115 aaKnown RBP13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SELPP16109 830 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PCMT1P22061 227 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ISL1P61371 349 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 TSPY1Q01534 308 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 PWP1Q13610 501 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 ZNF235Q14590 738 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 NR6A1Q15406 480 aa13.88□□□□□ -0.19
CLCNKA-202ENST00000375692 SLC39A12Q504Y0 691 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms