RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 NANOGP8Q6NSW7 305 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 IL27RAQ6UWB1 636 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 Q6ZSR9 355 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SNX20Q7Z614 316 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 KIAA2013Q8IYS2 634 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SFRP1Q8N474 314 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 DHRSXQ8N5I4 330 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PROKR1Q8TCW9 393 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ADAMTS16Q8TE57 1224 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 GFM2Q969S9 779 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ISG20Q96AZ6 181 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 TEX37Q96LM6 180 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ACOX2Q99424 681 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 BDH2Q9BUT1 245 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 NANOGQ9H9S0 305 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SMOXQ9NWM0 555 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 DNMT3BQ9UBC3 853 aaKnown RBP13.72□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF639Q9UID6 485 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 MTCH2Q9Y6C9 303 aa13.72□□□□□ -0.21
HMGCL-203ENST00000374490 PTPRSQ13332 1948 aa13.71□□□□□ -0.21
HMGCL-203ENST00000374490 GBF1Q92538 1859 aa13.71□□□□□ -0.21
HMGCL-203ENST00000374490 MYOCOSA0A1B0GUC4 107 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 TRIM64A6NGJ6 449 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 RFXAPO00287 272 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 FFAR2O15552 330 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 SOCS5O75159 536 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ABLIM3O94929 683 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ARHGEF15O94989 841 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 SEC24AO95486 1093 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 MBL2P11226 248 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 POU3F3P20264 500 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 IL12AP29459 219 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 OXTRP30559 389 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 TTKP33981 857 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 CAPGP40121 348 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ARL1P40616 181 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 PLD1Q13393 1074 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 GPR33Q49SQ1 333 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 SULT1C3Q6IMI6 304 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 LETMD1Q6P1Q0 360 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 CYP20A1Q6UW02 462 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 SCIMPQ6UWF3 145 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 SBSNQ6UWP8 590 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 LINGO4Q6UY18 593 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 MILR1Q7Z6M3 343 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 IFNEQ86WN2 208 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ERI1Q8IV48 349 aaKnown RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 TERB1Q8NA31 727 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 GLB1L3Q8NCI6 653 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 PIH1D2Q8WWB5 315 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 C2orf49Q9BVC5 232 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ASIC5Q9NY37 505 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 KLHL42Q9P2K6 505 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 VPS51Q9UID3 782 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 OAZ3Q9UMX2 235 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.22
HMGCL-203ENST00000374490 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 OR51B4Q9Y5P0 310 aa13.71□□□□□ -0.22
HMGCL-203ENST00000374490 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 H0YAE9 185 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 DLGAP1O14490 977 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 OR7A17O14581 309 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 ACOX3O15254 700 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CLOCKO15516 846 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TLL1O43897 1013 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TRMUO75648 421 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 MTHFD1P11586 935 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 BMP1P13497 986 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 VARSP26640 1264 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 MZF1P28698 734 aaPredicted RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CASP2P42575 452 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CREMQ03060 361 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TFF2Q03403 129 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TRAF3Q13114 568 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CDH18Q13634 790 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 TTLL9Q3SXZ7 439 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 FUT11Q495W5 492 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 FBXO48Q5FWF7 155 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CDKL4Q5MAI5 379 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 ABRAXAS1Q6UWZ7 409 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 SERPINA9Q86WD7 417 aa13.7□□□□□ -0.22
HMGCL-203ENST00000374490 CBARPQ8N350 705 aaPredicted RBP13.7□□□□□ -0.22
HMGCL-203ENST00000374490 OR52B6Q8NGF0 335 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms