RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 FYTTD1Q96QD9 318 aaKnown RBP18.25■□□□□ 0.51
SMPD1-201ENST00000342245 MLPHQ9BV36 600 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-201ENST00000342245 BRINP2Q9C0B6 783 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 GABARAPL1Q9H0R8 117 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 PXMP2Q9NR77 195 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 POLG2Q9UHN1 485 aa18.25■□□□□ 0.51
SMPD1-201ENST00000342245 ATP6V1G2-DDX39BF2Z307 99 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 IFRD1O00458 451 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 ACKR2O00590 384 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 F9P00740 461 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 CYBBP04839 570 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 MMP10P09238 476 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 GADD45AP24522 165 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 IGFBP5P24593 272 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 LIPAP38571 399 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 CTBP1Q13363 440 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 EFR3AQ14156 821 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 TBCEQ15813 527 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 GOLGA7BQ2TAP0 167 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 DACT2Q5SW24 774 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 SLC46A3Q7Z3Q1 461 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 LURAP1LQ8IV03 231 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 FRS2Q8WU20 508 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 NEDD4LQ96PU5 975 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 GTPBP2Q9BX10 602 aaKnown RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 UCK2Q9BZX2 261 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 KLHL20Q9Y2M5 609 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 GMPPBQ9Y5P6 360 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 GSTA4O15217 222 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 LCKP06239 509 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 ATF4P18848 351 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 SOX11P35716 441 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 CLCN5P51795 746 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 PLK1P53350 603 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 ELP6Q0PNE2 266 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 SLAMF1Q13291 335 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 IKZF1Q13422 519 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 PROX2Q3B8N5 592 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 RPS27LQ71UM5 84 aaKnown RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 TSPYL5Q86VY4 417 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 DENND6AQ8IWF6 608 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 OR8J3Q8NGG0 315 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 JPH1Q9HDC5 661 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 PRDM8Q9NQV8 689 aa18.24■□□□□ 0.51
SMPD1-201ENST00000342245 NUFIP1Q9UHK0 495 aaKnown RBP18.24■□□□□ 0.51
SMPD1-201ENST00000342245 PCM1Q15154 2024 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 C9JVG2 144 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 TLL1O43897 1013 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SERPINI2O75830 405 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 OR2B3O76000 313 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SH3BP2P78314 561 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 BAMBIQ13145 260 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 ABHD15Q6UXT9 468 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SCUBE3Q8IX30 993 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 RDH10Q8IZV5 341 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 NLGN1Q8N2Q7 840 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 VWA5B2Q8N398 1253 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 DNAJA4Q8WW22 397 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 TBC1D20Q96BZ9 403 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 CCDC120Q96HB5 630 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 NT5C1AQ9BXI3 368 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 QTRT2Q9H974 415 aaKnown RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 ASAH2Q9NR71 780 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 C14orf119Q9NWQ9 140 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SIX4Q9UIU6 781 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 TMPRSS11EQ9UL52 423 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SOWAHBA6NEL2 793 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 KCNK1O00180 336 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 ZBTB24O43167 697 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 NDUFA2O43678 99 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 MSCO60682 206 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 CYP2A6P11509 494 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 IL1RNP18510 177 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 MSH3P20585 1137 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 CASP2P42575 452 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 ETV1P50549 477 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SCNN1GP51170 649 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SNTA1Q13424 505 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 MAD2L1BPQ15013 274 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 TIGD6Q17RP2 521 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 EML3Q32P44 896 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 STYK1Q6J9G0 422 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 SHQ1Q6PI26 577 aaKnown RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 HS3ST5Q8IZT8 346 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 PPHLN1Q8NEY8 458 aaKnown RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 PYCR2Q96C36 320 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 MID1IP1Q9NPA3 183 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 INTS7Q9NVH2 962 aaKnown RBP18.23■□□□□ 0.51
SMPD1-201ENST00000342245 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
SMPD1-201ENST00000342245 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 SCELO95171 688 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 PRR35P0CG20 571 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 TPH1P17752 444 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CD72P21854 359 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CBLP22681 906 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CSTF2P33240 577 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CA5AP35218 305 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms