RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 M0R036 132 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 SYN1P17600 705 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CPN2P22792 545 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 WASH2PQ6VEQ5 465 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TCAIMQ8N3R3 496 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 OR5T2Q8NGG2 359 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 LENG1Q96BZ8 264 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 P2RY11Q96G91 374 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 STRA6Q9BX79 667 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TBL1XR1Q9BZK7 514 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 GRHL1Q9NZI5 618 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 GRIN2DO15399 1336 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 FRMPD4Q14CM0 1322 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 NOBOXO60393 691 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 MATKP42679 507 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 ELOAQ14241 798 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CDKL4Q5MAI5 379 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 USP30Q70CQ3 517 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CMTR2Q8IYT2 770 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 LSM14AQ8ND56 463 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 RFT1Q96AA3 541 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 LGR4Q9BXB1 951 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 EURLQ9NYK6 297 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 BAIAP2Q9UQB8 552 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TRPM1Q7Z4N2 1603 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 KCNU1A8MYU2 1149 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 HDAC3O15379 428 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 WFS1O76024 890 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 VARSP26640 1264 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.552e-6■■■■□ 22.6
SHANK2-201ENST00000338508 ATP6V0D1P61421 351 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM164Q5U3C3 297 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 EBNA1BP2Q99848 306 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 IPPKQ9H8X2 491 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TRNAU1APQ9NX07 287 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 PSKH1P11801 424 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 PPM1JQ5JR12 505 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TREML2Q5T2D2 321 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 LCN1P1Q5VSP4 162 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CNDP2Q96KP4 475 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 OSBPL11Q9BXB4 747 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 PNPLA3Q9NST1 481 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TVP23BQ9NYZ1 205 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 OR12D2P58182 307 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 KLF1Q13351 362 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 MON1AQ86VX9 555 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 GPALPP1Q8IXQ4 340 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TBC1D21Q8IYX1 336 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 COMMD3-BMI1R4GMX3 469 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 NEXMIFQ5QGS0 1516 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 C9IYK1 514 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 SSX5O60225 188 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 PEX14O75381 377 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 TUBG1P23258 451 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 GJA9P57773 515 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 ELP6Q0PNE2 266 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CAPSQ13938 189 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CATSPERGQ6ZRH7 1159 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 BOLLQ8N9W6 283 aaKnown RBP11.62□□□□□ -0.55
SHANK2-201ENST00000338508 PROKR2Q8NFJ6 384 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 EPS8L1Q8TE68 723 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.558e-7■■■■□ 23
SHANK2-201ENST00000338508 DGAT2Q96PD7 388 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■□ 22.6
SHANK2-201ENST00000338508 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 SLC17A7Q9P2U7 560 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
SHANK2-201ENST00000338508 ELOA3DA6NLF2 546 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 HSPA12AO43301 675 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 PGRP06401 933 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 PPIBP23284 216 aaKnown RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 TAS2R40P59535 323 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ELOA3BQ3SY89 546 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 THOC7Q6I9Y2 204 aaKnown RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 KIAA1161Q6NSJ0 714 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF782Q6ZMW2 699 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ELOA3Q8NG57 546 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 COQ8AQ8NI60 647 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ESAMQ96AP7 390 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 PPP1R14BQ96C90 147 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 KLRF1Q9NZS2 232 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 UPB1Q9UBR1 384 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 FARSAQ9Y285 508 aaKnown RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 A0A0U1RQJ8 604 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 PRR5-ARHGAP8B1AHC4 643 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 TRAFD1O14545 582 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ITGAVP06756 1048 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 ARHGAP8P85298 464 aa11.61□□□□□ -0.55
SHANK2-201ENST00000338508 TARDBPQ13148 414 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms