RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 RPS24P62847 133 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 BNC1Q01954 994 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 LGALS3BPQ08380 585 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 TEAD4Q15561 434 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ZFP69Q49AA0 526 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 BICRALQ6AI39 1079 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 LIN54Q6MZP7 749 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 MSANTD2Q6P1R3 559 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 RAB43Q86YS6 212 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 OR9I1Q8NGQ6 314 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 GTPBP3Q969Y2 492 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 CDK15Q96Q40 435 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 DUOX1Q9NRD9 1551 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ELNP15502 786 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 HMGCS1Q01581 520 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 CCDC157Q569K6 752 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 GPR153Q6NV75 609 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 RUVBL1Q9Y265 456 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 COQ6Q9Y2Z9 468 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ARPC2O15144 300 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 CTNNB1P35222 781 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ZNF132P52740 706 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 SF1Q15637 639 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ERI1Q8IV48 349 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 AHCYL2Q96HN2 611 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 MTERF1Q99551 399 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 S100A13Q99584 98 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 KIFC1Q9BW19 673 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 MCUBQ9NWR8 336 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 SLC2A6Q9UGQ3 507 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 TLR6Q9Y2C9 796 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 PTPRJQ12913 1337 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 H3BSA7 217 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 GLUD1P00367 558 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 GNAZP19086 355 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 MAPK12P53778 367 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ARHGAP1Q07960 439 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 PCLAFQ15004 111 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 HKDC1Q2TB90 917 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ATXN7L2Q5T6C5 722 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 TRPV3Q8NET8 790 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 SLC38A4Q969I6 547 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ZBTB26Q9HCK0 441 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 GSAPA4D1B5 854 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 RBM20Q5T481 1227 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 TREML1Q86YW5 311 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 PIWIL1Q96J94 861 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 COL1A1P02452 1464 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 RFPL1O75677 317 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 MYCLP1P12525 358 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 SELPP16109 830 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 GSK3BP49841 420 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 RAB25P57735 213 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 CYP4F8P98187 520 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 DPY19L1Q2PZI1 675 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 EMC10Q5UCC4 262 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 FBXL22Q6P050 247 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 NEK5Q6P3R8 708 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 TMPRSS11AQ6ZMR5 421 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 CAND1Q86VP6 1230 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 ART5Q96L15 291 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 CGREF1Q99674 301 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 OAS3Q9Y6K5 1087 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 SLC30A4O14863 429 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ERN1O75460 977 aaKnown RBP13.54□□□□□ -0.24
RTN4-202ENST00000337526 LAMP2P13473 410 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 SCN1BQ07699 218 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 MADCAM1Q13477 382 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
RTN4-202ENST00000337526 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms