RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MILR1Q7Z6M3 343 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 OR2T11Q8NH01 316 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 SKA2Q8WVK7 121 aaPredicted RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 FAM162AQ96A26 154 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 UROC1Q96N76 676 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 LRRC3Q9BY71 257 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZFC3H1O60293 1989 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 H3BMQ9 156 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 RCAN2Q14206 197 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 CLHC1Q8NHS4 586 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 TMBIM1Q969X1 311 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 COG8Q96MW5 612 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 CD320Q9NPF0 282 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 INTS10Q9NVR2 710 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 AFF4Q9UHB7 1163 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 MICAL3Q7RTP6 2002 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 ICMTO60725 284 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 SULT1C4O75897 302 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 RHOCP08134 193 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 CTPS1P17812 591 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 SPESP1Q6UW49 350 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 HID1Q8IV36 788 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 OR10A6Q8NH74 314 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 ULK4Q96C45 1275 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 CTRCQ99895 268 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 FNIP2Q9P278 1114 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 ERGIC3Q9Y282 383 aa16.27■□□□□ 0.19
CDC42EP4-201ENST00000335793 PRRC2BQ5JSZ5 2229 aaKnown RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 SOBPA7XYQ1 873 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 AGRPO00253 132 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 CYBRD1Q53TN4 286 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 SFRP1Q8N474 314 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 TEX26Q8N6G2 289 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PSD4Q8NDX1 1056 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 MDGA1Q8NFP4 955 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 OR10Q1Q8NGQ4 319 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 HTRA1Q92743 480 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 SMURF2Q9HAU4 748 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 LATS2Q9NRM7 1088 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 COMMD8Q9NX08 183 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PCTPQ9UKL6 214 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 RAI2Q9Y5P3 530 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 TSC2P49815 1807 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PCM1Q15154 2024 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 INSIG1O15503 277 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 BNIP3LO60238 219 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PARNO95453 639 aaKnown RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 BCL10O95999 233 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 IL7RP16871 459 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 IL12AP29459 219 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PIGFQ07326 219 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 SELENBP1Q13228 472 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 FAM214AQ32MH5 1076 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 CCNYL2Q5T2Q4 361 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 LILRB4Q8NHJ6 448 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PKP3Q9Y446 797 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 PCDHB9Q9Y5E1 797 aa16.26■□□□□ 0.19
CDC42EP4-201ENST00000335793 FAM234BA2RU67 622 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 ACOX3O15254 700 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 CST1P01037 141 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 ANXA6P08133 673 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 UMPSP11172 480 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 CCNA2P20248 432 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 GDF5P43026 501 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 HSPA7P48741 367 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 TTPAP49638 278 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 EEFSECP57772 596 aaKnown RBP16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 ERVPABLB-1P60509 514 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 SELPLGQ14242 412 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 CRY1Q16526 586 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 TXNDC11Q6PKC3 985 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 LYSMD3Q7Z3D4 306 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 GRAMD2AQ8IUY3 354 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 ZNF555Q8NEP9 628 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 OR6K2Q8NGY2 324 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 PROKR1Q8TCW9 393 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 KPNA4O00629 521 aaPredicted RBP16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 TBC1D4O60343 1298 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 MAN1A2O60476 641 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 EPOP01588 193 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 TTKP33981 857 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 SLC11A2P49281 568 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 COPZ1P61923 177 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 FOXM1Q08050 763 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 PTGR1Q14914 329 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 KCNA10Q16322 511 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 GALNT7Q86SF2 657 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 PROSER1Q86XN7 944 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 HS3ST5Q8IZT8 346 aa16.25■□□□□ 0.19
CDC42EP4-201ENST00000335793 CITED4Q96RK1 184 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms