RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZDHHC12Q96GR4 267 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 SIGLEC10Q96LC7 697 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 MVB12BQ9H7P6 319 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 SLC24A2Q9UI40 661 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 VPS9D1Q9Y2B5 631 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 RPS6KL1Q9Y6S9 549 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 IGF2RP11717 2491 aa23.76■■□□□ 1.39
SDF2L1-201ENST00000248958 SLC5A10A0PJK1 596 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 NVLO15381 856 aaKnown RBP23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 CAPN5O15484 640 aaPredicted RBP23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 IVDP26440 423 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 TYSND1Q2T9J0 566 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 SYTL3Q4VX76 610 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 DNAJC21Q5F1R6 531 aaKnown RBP23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 SNAP47Q5SQN1 464 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 LDB1Q86U70 411 aaPredicted RBP23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 PDZD3Q86UT5 571 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 ACVR1CQ8NER5 493 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 C9orf72Q96LT7 481 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 FERD3LQ96RJ6 166 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 NAT9Q9BTE0 207 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 ACSL6Q9UKU0 697 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 MAD1L1Q9Y6D9 718 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 ACACAQ13085 2346 aa23.75■■□□□ 1.39
SDF2L1-201ENST00000248958 PMS2P1A4D2B8 440 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 B4E171 279 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 KPNA5O15131 536 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 ITIH1P19827 911 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 PDHA2P29803 388 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 TSPAN7P41732 249 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 PREPP48147 710 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 MAPK10P53779 464 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 THOC5Q13769 683 aaKnown RBP23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 BOP1Q14137 746 aaKnown RBP23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 PTRHD1Q6GMV3 140 aaKnown RBP23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 DUS1LQ6P1R4 473 aaKnown RBP23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 OOSP2Q86WS3 158 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 ASZ1Q8WWH4 475 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 RSC1A1Q92681 617 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 TFGQ92734 400 aaPredicted RBP23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 STAMBPL1Q96FJ0 436 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 DCBLD2Q96PD2 775 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 TAAR9Q96RI9 348 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 P2RY12Q9H244 342 aa23.74■■□□□ 1.39
SDF2L1-201ENST00000248958 A8MU76 341 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 H3BMM5 538 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 TTI1O43156 1089 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 CD82P27701 267 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 SLC5A2P31639 672 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 ADARP55265 1226 aaKnown RBP23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 RAB15P59190 212 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 NEPROQ6NW34 567 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 SPATA4Q8NEY3 305 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 GABPB2Q8TAK5 448 aaPredicted RBP23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 CALML6Q8TD86 181 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 SNF8Q96H20 258 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 FCRL3Q96P31 734 aaPredicted RBP23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 TGM7Q96PF1 710 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 KRT12Q99456 494 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 DPH1Q9BZG8 443 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 INTS10Q9NVR2 710 aaKnown RBP23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 KLHL3Q9UH77 587 aa23.73■■□□□ 1.39
SDF2L1-201ENST00000248958 URB1O60287 2271 aaKnown RBP23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 CHD6Q8TD26 2715 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 ZCWPW2A0A1B0GU75 182 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 UBA6A0AVT1 1052 aaPredicted RBP23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 OR5K3A6NET4 321 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 TTC4O95801 387 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 APOA4P06727 396 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 FGF3P11487 239 aaPredicted RBP23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 CCL4P13236 92 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 PGAM1P18669 254 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 CCR7P32248 378 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 ETV5P41161 510 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 GFERP55789 205 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 TMED2Q15363 201 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 LONRF1Q17RB8 773 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 MAATS1Q7Z4T9 603 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 PRSS42Q7Z5A4 293 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 CILP2Q8IUL8 1156 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 PDIK1LQ8N165 341 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 BBOF1Q8ND07 529 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 KCNE4Q8WWG9 221 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 USP7Q93009 1102 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 CD180Q99467 661 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 PCDHGA3Q9Y5H0 932 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 FAM169AQ9Y6X4 670 aa23.72■■□□□ 1.39
SDF2L1-201ENST00000248958 APC2O95996 2303 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 FAM187AA6NFU0 413 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 GOLGA8KD6RF30 607 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 GOLGA8TH3BQL2 631 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 MATN2O00339 956 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 KDM1AO60341 852 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 GPC4O75487 556 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 ESR1P03372 595 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 ACADLP28330 430 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 EIF3BP55884 814 aaKnown RBP23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 BRD3Q15059 726 aa23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 HIBCHQ6NVY1 386 aaPredicted RBP23.71■■□□□ 1.39
SDF2L1-201ENST00000248958 ARMC6Q6NXE6 501 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms