RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MICAL2O94851 1124 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 DSG3P32926 999 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 EPHX2P34913 555 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 CD79BP40259 229 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 HERVK_113P63132 956 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 DTX3Q8N9I9 347 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 ST8SIA4Q92187 359 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 SPATA31A3Q5VYP0 1347 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 PPLO60437 1756 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 CDRT1O95170 752 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 MAOBP27338 520 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 DNAJA1P31689 397 aaKnown RBP12.7□□□□□ -0.38
VAMP4-201ENST00000236192 AP3S2P59780 193 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 CBLBQ13191 982 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 HSDL1Q3SXM5 330 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 KANK2Q63ZY3 851 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 LRRC66Q68CR7 880 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 FAM198BQ6UWH4 519 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 CNTN3Q9P232 1028 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 SCO1O75880 301 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 OR56A5P0C7T3 313 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SRCP12931 536 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CYP2C18P33260 490 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 GPR19Q15760 415 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 LPAR1Q92633 364 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SETD4Q9NVD3 440 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 OGTO15294 1046 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CPNE6O95741 557 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF14P17017 642 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 PITPNAQ00169 270 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 GRAPQ13588 217 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 KYAT1Q16773 422 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 DUSP6Q16828 381 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 LRRN1Q6UXK5 716 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF490Q9ULM2 529 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 STX16O14662 325 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 TP53P04637 393 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 HSD17B1P14061 328 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 MILR1Q7Z6M3 343 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 OR10A6Q8NH74 314 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 LRRC15Q8TF66 581 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 RNF139Q8WU17 664 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ITCHQ96J02 903 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 AFF4Q9UHB7 1163 aaKnown RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF175Q9Y473 711 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CLDN24A6NM45 220 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CDK2AP1O14519 115 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SUV39H1O43463 412 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ERBB2P04626 1255 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 GADD45AP24522 165 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ERVK-25P63136 954 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 EMX1Q04741 257 aaPredicted RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CD47Q08722 323 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 CDH18Q13634 790 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 USP30Q70CQ3 517 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 TXNDC5Q8NBS9 432 aaKnown RBP12.69□□□□□ -0.38
VAMP4-201ENST00000236192 AMBNQ9NP70 447 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 PTTG3PQ9NZH4 202 aa12.69□□□□□ -0.38
VAMP4-201ENST00000236192 SPEF2Q9C093 1822 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 FAM234BA2RU67 622 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GABARAPO95166 117 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 SOAT1P35610 550 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ALDH9A1P49189 494 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CAPZA1P52907 286 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CRTC2Q53ET0 693 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 XKR3Q5GH77 459 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PRR5LQ6MZQ0 368 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 Q8N402 240 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 WASH6PQ9NQA3 447 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 FAM208AQ9UK61 1670 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 NFASCO94856 1347 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 KANTRA0A1W2PQU2 76 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms