RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Gm10424A0A0J9YVD0 481 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ccdc194A0A140LIT1 234 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 SelenovD3YXG1 328 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Srp72F8VQC1 671 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r85G3UW56 850 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Nkx1-1G3UXB3 402 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm7971J3QMM8 481 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Htr7P32304 448 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Serpinb5P70124 375 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 BtrcQ3ULA2 605 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tmem102Q3UPR7 509 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 HecaQ3V1N5 544 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 CapslQ6P8Y1 208 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Fam126aQ6P9N1 521 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Trit1Q80UN9 467 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Timm29Q8BGX2 266 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dlgap2Q8BJ42 1059 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Bend5Q8C6D4 421 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Parp9Q8CAS9 866 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Lrrc3bQ8VCH9 259 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 OptcQ920A0 328 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Mta3Q924K8 591 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tnip2Q99JG7 430 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Batf3Q9D275 118 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Spry1Q9QXV9 313 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Il18rapQ9Z2B1 614 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Zfp558E9Q1J0 407 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r116E9Q6I0 856 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Sod3O09164 251 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 JunP05627 334 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 CryaaP24622 196 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ptger3P30557 365 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Agtr2P35374 363 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Defa8P50706 81 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ap1s1P61967 158 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Larp7Q05CL8 570 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 TsnQ62348 228 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr1080Q7TR67 313 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Znf423Q80TS5 1292 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Svs2Q8BS30 375 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Stx5Q8K1E0 355 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Spp2Q8K1I3 203 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Abhd11Q8K4F5 307 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 WwoxQ91WL8 414 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 TmlheQ91ZE0 421 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Snrpb2Q9CQI7 225 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Fbxl20Q9CZV8 436 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vsig1Q9D2J4 407 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ephx1Q9D379 455 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 KelQ9EQF2 713 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Adam21Q9JI76 729 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pkp3Q9QY23 797 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 AicdaQ9WVE0 198 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 DnpepQ9Z2W0 473 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Alms1Q8K4E0 3251 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 OtofQ9ESF1 1997 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Igkv16-104A0A0B4J1I1 116 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Igkv12-46A0A140T8P6 115 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Mcf2A2AEU1 1111 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Klhl4B1AZR0 717 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r21K7N6Y7 853 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r20L7N2B1 853 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cer1O55233 272 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Hk1P17710 974 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cd19P25918 547 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Psmd7P26516 321 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 BrafP28028 804 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rbp1Q00915 135 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Taar8aQ5QD07 344 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cyp2r1Q6VVW9 501 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Zfyve1Q810J8 777 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 SvopQ8BFT9 548 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Lair1Q8BG84 263 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Strip2Q8C9H6 844 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slc46a2Q8CA03 479 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr1208Q8VG47 308 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slco1a5Q91YY5 670 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tcam1Q99NB3 548 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Nudt7Q99P30 236 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ppil6Q9D6D8 278 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Necab3Q9D6J4 353 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rpn2Q9DBG6 631 aaKnown RBP13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Spag4Q9JJF2 443 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 CtsjQ9R014 334 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr742A2RTP5 311 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 MlxO08609 298 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Scamp3O35609 349 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tpst2O88856 376 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 TyrP11344 533 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ptger4P32240 513 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 PrkacbP68181 351 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cntn5P68500 1098 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Sec31bQ3TZ89 1158 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Grxcr1Q50H32 290 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Taar7aQ5QD12 358 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tnfaip2Q61333 691 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 R3hcc1lQ8BJM3 775 aaKnown RBP13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 MtbpQ8BJS8 894 aaKnown RBP13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Lrrtm3Q8BZ81 582 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tgif2Q8C0Y1 237 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms