RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Arrb2Q91YI4 410 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 MrgprhQ99MT8 321 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cep41Q99NF3 373 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm45736A0A1B0GS18 427 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dennd3A2RT67 1274 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Zfp384E9Q1A5 584 aaKnown RBP8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Zfp94E9Q6Y4 486 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r46L7N282 809 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r29L7N2D4 852 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Scgb1b2O35176 93 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cdh1P09803 884 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Sstr3P30935 428 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 FshrP35378 692 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cfl2P45591 166 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 SrprbP47758 269 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cfap52Q5F201 620 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Trim28Q62318 834 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Syt16Q7TN83 639 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Otub1Q7TQI3 271 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Thnsl2Q80W22 483 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Acad11Q80XL6 779 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mettl21cQ8BLU2 248 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fam46bQ8C152 427 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Exosc2Q8VBV3 293 aaKnown RBP8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pcdhac2Q91Y09 1006 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 HnrnpabQ99020 285 aaKnown RBP8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pex6Q99LC9 981 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rpn2Q9DBG6 631 aaKnown RBP8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Usp14Q9JMA1 493 aaKnown RBP8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 PigqQ9QYT7 581 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Iigp1Q9QZ85 413 aa8.84□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Golga3P55937 1487 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Olfr1458A0A1L1SSD5 307 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Fam209A2APA5 170 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Gm5093E9PZB3 174 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Vmn2r35E9Q7U8 861 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 KlO35082 1014 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Birc5O70201 140 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Papss2O88428 621 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Icam2P35330 277 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 ItgavP43406 1044 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Ufm1P61961 85 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Lilrb3P97484 841 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 MaeaQ4VC33 396 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Rxfp1Q6R6I7 758 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tubb2aQ7TMM9 445 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 AptxQ7TQC5 342 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Olfr1036Q7TR85 310 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Gprc5aQ8BHL4 356 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Gtdc1Q8BW56 445 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tspan33Q8R3S2 283 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Creb3l3Q91XE9 479 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Msh4Q99MT2 958 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Prl7c1Q9CRB5 251 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tubb2bQ9CWF2 445 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tchhl1Q9D3P1 638 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tob2Q9JM55 345 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Kcnd2Q9Z0V2 630 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Zfp804bA0A0G2JGH6 1343 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Ccdc18Q640L5 1455 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Wdr72D3YYM4 1114 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Rpl7aP12970 266 aaKnown RBP8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 PitpnaP53810 271 aaKnown RBP8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Slc45a2P58355 530 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 ChatQ03059 641 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Srebf2Q3U1N2 1130 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Vps54Q5SPW0 977 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Slc26a2Q62273 739 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 SrmQ64674 302 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Ccdc134Q8C7V8 229 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Chrnb4Q8R493 495 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Olfr508Q8VG42 310 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Atp6v0bQ91V37 205 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 1700129C05RikQ9CQ77 218 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Mtfr1lQ9CWE0 289 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Prr23a3Q9CWP9 254 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Rpl11Q9CXW4 178 aaKnown RBP8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Lyrm7Q9DA03 104 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Vmn1r50Q9EP51 310 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Eif2s3xQ9Z0N1 472 aaKnown RBP8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Eif2s3yQ9Z0N2 472 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Fam47eD3YWC7 402 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Vps26aP40336 327 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Igfbp4P47879 254 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 SftpbP50405 377 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 LipeP54310 759 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Rab1AP62821 205 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Lgals3bpQ07797 577 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Sec24aQ3U2P1 1090 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Slc47a2Q3V050 573 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Sel1l2Q3V172 688 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Sec22cQ8BXT9 303 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Serinc2Q8K0E7 450 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Irak3Q8K4B2 609 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Nt5c1bQ91YE9 573 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Diras1Q91Z61 198 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Pink1Q99MQ3 580 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Spg21Q9CQC8 308 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Hsbp1Q9CQZ1 76 aa8.83□□□□□ -1
Clcn3-202ENSMUST00000056508 Tktl2Q9D4D4 627 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms