RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ddx59Q9DBN9 619 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cst9Q9Z0H6 137 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Stk25Q9Z2W1 426 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr316A0A0N4SVP2 306 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 CerklA2AQH1 525 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ssxb6A2BI74 170 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Iqca1lA6H690 825 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm6685D3YYP3 228 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Acbd4E9Q289 327 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm17615E9Q9P2 165 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r46L7N282 809 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kpna4O35343 521 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 CartptP56388 129 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rps14P62264 151 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prss57Q14B24 284 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 UcmaQ14BU0 138 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pag1Q3U1F9 429 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 BtrcQ3ULA2 605 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr318Q5NCD7 306 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm11492Q5ND19 536 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 XpaQ64267 272 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fbxw8Q8BIA4 598 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prkaa2Q8BRK8 552 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Plekho2Q8K124 495 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr1469Q8VFW5 309 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam3cQ91VU0 227 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Masp2Q91WP0 685 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Smim11aQ99J19 55 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q9CWU4 180 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dus2Q9D7B1 493 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Acsl4Q9QUJ7 711 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 PrepQ9QUR6 710 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tex13aA2AFS9 377 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nt5c1aA3KFX0 365 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 UprtB1AVZ0 310 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kif6E9PX57 802 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tsc22d2E9Q7M2 769 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tex16F6WNY1 1150 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rab11fip2G3XA57 512 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Bhlhe40O35185 411 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Impdh1P50096 514 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mxd1P50538 227 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Nrg2P56974 756 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 NficP70255 439 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 G6pdxQ00612 515 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tbc1d1Q60949 1255 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prm3Q62100 101 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ptk6Q64434 451 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gga2Q6P5E6 603 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dusp16Q6PCP3 660 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kiss1Q6Y4S4 130 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lrp10Q7TQH7 713 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tmem198Q8BG75 360 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 SybuQ8BHS8 665 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ccdc186Q8C9S4 917 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Snx8Q8CFD4 459 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Crispld1Q8CGD2 500 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Klhl2Q8JZP3 593 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Txndc11Q8K2W3 948 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mettl22Q8R1C6 393 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kctd5Q8VC57 234 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r71Q8VIC0 307 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Usb1Q91W78 267 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Abcg4Q91WA9 646 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ndufv2Q9D6J6 248 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prorsd1Q9D820 169 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ppp1r2Q9DCL8 206 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rabgef1Q9JM13 491 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 H2afyQ9QZQ8 372 aaKnown RBP8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 DmdP11531 3678 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r88E9Q235 316 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Opn1mwO35599 359 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cbx4O55187 551 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 ChadO55226 358 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 ZfrO88532 1074 aaKnown RBP8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Scg5P12961 212 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc2a3P32037 493 aaKnown RBP8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tac1P41539 130 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 OstnP61364 130 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Msx2Q03358 267 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Defb23Q30KP0 166 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ak8Q32M07 479 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Q3KNL4 93 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Kctd8Q50H33 476 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Grhl3Q5FWH3 603 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 SynaQ5G5D5 617 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ranbp10Q6VN19 620 aaKnown RBP8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ube2r2Q6ZWZ2 238 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mvb12aQ78HU3 271 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Scn4bQ7M729 228 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 InavaQ7TN12 663 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Stk38lQ7TSE6 464 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 B430218F22RikQ8BQR5 223 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trim42Q9D2H5 723 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 AvenQ9D9K3 342 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Uba7Q9DBK7 977 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rnft1Q9DCN7 395 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Jph3Q9ET77 744 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc25a13Q9QXX4 676 aa8.55□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm28360A0A087WR25 190 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms