RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 APOL5Q9BWW9 433 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 UGT2B28Q9BY64 529 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 PAIP1Q9H074 479 aaKnown RBP10.54□□□□□ -0.72
PSPC1-207ENST00000635251 RETREG1Q9H6L5 497 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 RRAGCQ9HB90 399 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 FANCEQ9HB96 536 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 CDH7Q9ULB5 785 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 EIF3LQ9Y262 564 aaKnown RBP10.54□□□□□ -0.72
PSPC1-207ENST00000635251 DHRS7Q9Y394 339 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 MAGED1Q9Y5V3 778 aaPredicted RBP10.54□□□□□ -0.72
PSPC1-207ENST00000635251 A0A1B0GVM2 712 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 H7C4K7 107 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 FFAR3O14843 346 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 GPR42O15529 346 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 FFAR2O15552 330 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 B4GAT1O43505 415 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 F11P03951 625 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 CTPS1P17812 591 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 ATF6P18850 670 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 MAP4P27816 1152 aaKnown RBP10.54□□□□□ -0.72
PSPC1-207ENST00000635251 AKT1P31749 480 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 PIK3CGP48736 1102 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 FAM189BP81408 668 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 CRY1Q16526 586 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 FGD3Q5JSP0 725 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 RTP2Q5QGT7 225 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 BROXQ5VW32 411 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 ZNF773Q6PK81 442 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 ZDHHC13Q8IUH4 622 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 TTC30BQ8N4P2 665 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 SLC13A3Q8WWT9 602 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 TUBA1CQ9BQE3 449 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 CLPBQ9H078 707 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 P2RY12Q9H244 342 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 GKN1Q9NS71 199 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 TBC1D23Q9NUY8 699 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 DNAAF2Q9NVR5 837 aaKnown RBP10.54□□□□□ -0.72
PSPC1-207ENST00000635251 PCDHB9Q9Y5E1 797 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 PCDHB1Q9Y5F3 818 aa10.54□□□□□ -0.72
PSPC1-207ENST00000635251 SH3PXD2BA1X283 911 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 G3V2T6 193 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 H7C0S8 307 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 RGS14O43566 566 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 DFNA5O60443 496 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 CST1P01037 141 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■□□□□ 8.5
PSPC1-207ENST00000635251 SHMT2P34897 504 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 GATMP50440 423 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 RHOAP61586 193 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 NKX3-2P78367 333 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ARF5P84085 180 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 SMARCB1Q12824 385 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 IMPG1Q17R60 797 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 HECTD3Q5T447 861 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 PRSS55Q6UWB4 352 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 C8orf59Q8N0T1 100 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ZNF555Q8NEP9 628 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 OR10A6Q8NH74 314 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 FAM162AQ96A26 154 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 NRBF2Q96F24 287 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ZNF583Q96ND8 569 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 DOK1Q99704 481 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 DPY30Q9C005 99 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 CIPCQ9C0C6 399 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 NSUN3Q9H649 340 aaKnown RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 TMEM161AQ9NX61 479 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 WWOXQ9NZC7 414 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 VAPAQ9P0L0 249 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ZNHIT2Q9UHR6 403 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ADGRE2Q9UHX3 823 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ZNF711Q9Y462 761 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 PCDHB7Q9Y5E2 793 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 GBF1Q92538 1859 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 H0Y626 953 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 H0Y858 1186 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 UPK1AO00322 258 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 COCHO43405 550 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 TBC1D4O60343 1298 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 TRIM16O95361 564 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ALPLP05186 524 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 TCF3P15923 654 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 ZNF7P17097 686 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 JAK1P23458 1154 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 POLR2IP36954 125 aaKnown RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 SLC11A1P49279 550 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 RGS4P49798 205 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 PRKCZQ05513 592 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 BNIP3Q12983 259 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 MAD2L1Q13257 205 aaPredicted RBP10.53□□□□□ -0.72
PSPC1-207ENST00000635251 PTGR1Q14914 329 aa10.53□□□□□ -0.72
PSPC1-207ENST00000635251 MAPKAPK3Q16644 382 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms