RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 G6PDP11413 515 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ELNP15502 786 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DGKAP23743 735 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DCKP27707 260 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 HMOX2P30519 316 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 PPP3CCP48454 512 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 CSNK1DP48730 415 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 RGS4P49798 205 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALDH3A2P51648 485 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 PTPN5P54829 565 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DAG1Q14118 895 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SELPLGQ14242 412 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 PTPRRQ15256 657 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 NR6A1Q15406 480 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 AP5B1Q2VPB7 878 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 C18orf21Q32NC0 220 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM98BQ52LJ0 330 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 CDKL4Q5MAI5 379 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ARMC12Q5T9G4 340 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SULT1C3Q6IMI6 304 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 TBPL2Q6SJ96 375 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 FRA10AC1Q70Z53 315 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 C16orf59Q7L2K0 433 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SNX20Q7Z614 316 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 MILR1Q7Z6M3 343 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 RALGPS2Q86X27 583 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 CROCCP3Q8IVE0 287 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 PLPP6Q8IY26 295 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 RBFAQ8N0V3 343 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 CBARPQ8N350 705 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 GLB1L3Q8NCI6 653 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DBF4BQ8NFT6 615 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 DNAJB8Q8NHS0 232 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 PIH1D2Q8WWB5 315 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 POP5Q969H6 163 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 C12orf43Q96C57 262 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ISOC1Q96CN7 298 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 EID2BQ96D98 161 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALG14Q96F25 216 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 MYO19Q96H55 970 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZNF583Q96ND8 569 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ZBTB18Q99592 522 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 UGT2B28Q9BY64 529 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SLC29A3Q9BZD2 475 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 OSBPL6Q9BZF3 934 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 GPR63Q9BZJ6 419 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 CLPBQ9H078 707 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 RDH14Q9HBH5 336 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SARS2Q9NP81 518 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 GKN1Q9NS71 199 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 ELOVL2Q9NXB9 296 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 SMPD4Q9NXE4 827 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 USE1Q9NZ43 259 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 KLHL42Q9P2K6 505 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 AFF4Q9UHB7 1163 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 TRPS1Q9UHF7 1281 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 GNPTGQ9UJJ9 305 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 EIF3LQ9Y262 564 aaKnown RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 POLR3HQ9Y535 204 aaPredicted RBP9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 GMEB1Q9Y692 573 aa9.46□□□□□ -0.9
IGHV3-54-201ENST00000622166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 A0A1W2PQ45 241 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 A0A1W2PQY0 241 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 IQCF5A8MTL0 148 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ARVCFO00192 962 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RGS14O43566 566 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RSL1D1O76021 490 aaKnown RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ABLIM3O94929 683 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 KCNH1O95259 989 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 SEC24AO95486 1093 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 PRAMEF12O95522 483 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 SNAP29O95721 258 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CPNE6O95741 557 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ALBP02768 609 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 THRBP10828 461 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 PCSK2P16519 638 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 HOXB6P17509 224 aaKnown RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 IL1RNP18510 177 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RPL10P27635 214 aaKnown RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 MZF1P28698 734 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CASP2P42575 452 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 HNRNPFP52597 415 aaKnown RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 DGKQP52824 942 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RHOAP61586 193 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CTBSQ01459 385 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CAP1Q01518 475 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CHRNB3Q05901 458 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 BFSP2Q13515 415 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 MYBPC3Q14896 1274 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 ABRAXAS2Q15018 415 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 CDKN3Q16667 212 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RFTN2Q52LD8 501 aaPredicted RBP9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RUNDC3AQ59EK9 446 aa9.45□□□□□ -0.9
IGHV3-54-201ENST00000622166 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms