RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CSF3RQ99062 836 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 GPR21Q99679 349 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 FUNDC2Q9BWH2 189 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 SLAMF8Q9P0V8 285 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 ERVW-1Q9UQF0 538 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 PCDHGA8Q9Y5G5 932 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 CORINQ9Y5Q5 1042 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 CPQQ9Y646 472 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 HTTP42858 3142 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 FAM92AA1XBS5 289 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 NPEPPSL1A6NEC2 478 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 C2orf81A6NN90 581 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 INPPL1O15357 1258 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 FKTNO75072 461 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 CNTN5O94779 1100 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 TSPAN12O95859 305 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 AKT1P31749 480 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 GRK3P35626 688 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 AFF1P51825 1210 aaKnown RBP21.28■■□□□ 1
SPSB3-208ENST00000566339 KIAA0040Q15053 153 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 TAF1CQ15572 869 aaPredicted RBP21.28■■□□□ 1
SPSB3-208ENST00000566339 NFE2Q16621 373 aaPredicted RBP21.28■■□□□ 1
SPSB3-208ENST00000566339 ZIK1Q3SY52 487 aaPredicted RBP21.28■■□□□ 1
SPSB3-208ENST00000566339 ZNF691Q5VV52 312 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 FBXL22Q6P050 247 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 METTL2BQ6P1Q9 378 aaKnown RBP21.28■■□□□ 1
SPSB3-208ENST00000566339 EID3Q8N140 333 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 SETD9Q8NE22 299 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 NODALQ96S42 347 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 PAAF1Q9BRP4 392 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 AKIP1Q9NQ31 210 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 IKZF3Q9UKT9 509 aa21.28■■□□□ 1
SPSB3-208ENST00000566339 MYO16Q9Y6X6 1858 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 ZNF99A8MXY4 864 aaPredicted RBP21.27■■□□□ 1
SPSB3-208ENST00000566339 GSTA4O15217 222 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 OR4F21O95013 312 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 IGLV3-27P01718 113 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 CASP2P42575 452 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 MAGEA11P43364 429 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 NRIP1P48552 1158 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 CCR3P51677 355 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 HNRNPFP52597 415 aaKnown RBP21.27■■□□□ 1
SPSB3-208ENST00000566339 ITGADQ13349 1161 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 C5orf22Q49AR2 442 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 SLC16A12Q6ZSM3 486 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 CHST15Q7LFX5 561 aaPredicted RBP21.27■■□□□ 1
SPSB3-208ENST00000566339 SPNS2Q8IVW8 549 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 STK40Q8N2I9 435 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 ZNF548Q8NEK5 533 aaPredicted RBP21.27■■□□□ 1
SPSB3-208ENST00000566339 LPPQ93052 612 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 TRIM8Q9BZR9 551 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 TRIT1Q9H3H1 467 aaKnown RBP21.27■■□□□ 1
SPSB3-208ENST00000566339 FBXO8Q9NRD0 319 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 GALPQ9UBC7 116 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 ORC6Q9Y5N6 252 aa21.27■■□□□ 1
SPSB3-208ENST00000566339 CCDC85CA6NKD9 419 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 LSM1O15116 133 aaKnown RBP21.26■□□□□ 0.99
SPSB3-208ENST00000566339 WDR47O94967 919 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ARHGEF15O94989 841 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 CST1P01037 141 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 PCMT1P22061 227 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 NFKBIAP25963 317 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 PRDX3P30048 256 aaKnown RBP21.26■□□□□ 0.99
SPSB3-208ENST00000566339 PGFP49763 221 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 KPNA1P52294 538 aaPredicted RBP21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ISL1P61371 349 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 PURAQ00577 322 aaKnown RBP21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ATP1A4Q13733 1029 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ATG9BQ674R7 924 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 TMCO5AQ8N6Q1 288 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ZNF513Q8N8E2 541 aaPredicted RBP21.26■□□□□ 0.99
SPSB3-208ENST00000566339 PNPLA1Q8N8W4 532 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 SLC47A1Q96FL8 570 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 MAGEH1Q9H213 219 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 CD274Q9NZQ7 290 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 SH3BP1Q9Y3L3 701 aa21.26■□□□□ 0.99
SPSB3-208ENST00000566339 ELOVL7A1L3X0 281 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 H7C0S8 307 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 J3QRK9 145 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 NDUFS2O75306 463 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 ESR1P03372 595 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 IL6P05231 212 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 TCF3P15923 654 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 ERVPABLB-1P60509 514 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 GNA12Q03113 381 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 MVKQ03426 396 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 CD47Q08722 323 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 PTPRNQ16849 979 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 ZCCHC7Q8N3Z6 543 aaKnown RBP21.25■□□□□ 0.99
SPSB3-208ENST00000566339 SLC13A3Q8WWT9 602 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 IGSF8Q969P0 613 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 FBXL8Q96CD0 374 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 ALPK1Q96QP1 1244 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 GABARAPL1Q9H0R8 117 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 ACTL8Q9H568 366 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 WARS2Q9UGM6 360 aaKnown RBP21.25■□□□□ 0.99
SPSB3-208ENST00000566339 EIF3LQ9Y262 564 aaKnown RBP21.25■□□□□ 0.99
SPSB3-208ENST00000566339 LOC100130705A0A1B0GUX0 176 aa21.25■□□□□ 0.99
SPSB3-208ENST00000566339 FAM220BPB1ANY3 271 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms