RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
IRF9-213ENST00000561342 ABCA2Q9BZC7 2435 aa11.59□□□□□ -0.55
IRF9-213ENST00000561342 HIVEP1P15822 2718 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 KLHL33A6NCF5 533 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 PRSS44E7EML9 344 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 DYNC1I1O14576 645 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 FGF5P12034 268 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 GFERP55789 205 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 DMPKQ09013 629 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 TFDP2Q14188 446 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 TCEAL1Q15170 157 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 PCSK7Q16549 785 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 WHAMMP3Q1A5X7 153 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 LDLRAP1Q5SW96 308 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 RFX6Q8HWS3 928 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 ZNF547Q8IVP9 402 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 CEP112Q8N8E3 955 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 UBXN4Q92575 508 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 STAMBPL1Q96FJ0 436 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 TEKT5Q96M29 485 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 VAT1Q99536 393 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 TRIM55Q9BYV6 548 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 LACRTQ9GZZ8 138 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 ACSS2Q9NR19 701 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
IRF9-213ENST00000561342 SEMA5BQ9P283 1151 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 FAM153AQ9UHL3 310 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 CROTQ9UKG9 612 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 PCDHGA6Q9Y5G7 932 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 MRFAP1Q9Y605 127 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 SLC30A1Q9Y6M5 507 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 PDZD2O15018 2839 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 CSMD2Q7Z408 3487 aa11.58□□□□□ -0.56
IRF9-213ENST00000561342 A0A0U1RQJ8 604 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 LOC285095A0A1B0GVY8 99 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 C21orf140B9A014 251 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CREG1O75629 220 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 RASSF9O75901 435 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 KRT1P04264 644 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PIRTP0C851 137 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 BRAFP15056 766 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 TYRP1P17643 537 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 NELFEP18615 380 aaKnown RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 ITGA3P26006 1051 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PTPN3P26045 913 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 TMEM115Q12893 351 aaPredicted RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 ITGA9Q13797 1035 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 GPR18Q14330 331 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PRKD1Q15139 912 aaPredicted RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 CACHD1Q5VU97 1274 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PAPD7Q5XG87 772 aaKnown RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 C11orf96Q7Z7L8 435 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 AMZ2Q86W34 360 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 KMT5CQ86Y97 462 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 HPS6Q86YV9 775 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 TRAPPC5Q8IUR0 188 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 RASGRP3Q8IV61 690 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 SYCE1Q8N0S2 351 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 Q8NA96 180 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 GDAP1Q8TB36 358 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 TFB1MQ8WVM0 346 aaKnown RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 ZFPM2Q8WW38 1151 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PNPLA2Q96AD5 504 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 ZNF514Q96K75 400 aaPredicted RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 OR6C1Q96RD1 312 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CD180Q99467 661 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PDE7BQ9NP56 450 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 ARFGAP3Q9NP61 516 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 TRIM10Q9UDY6 481 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CDC23Q9UJX2 597 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 PADI1Q9ULC6 663 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 G3BP2Q9UN86 482 aaKnown RBP11.57□□□□□ -0.56
IRF9-213ENST00000561342 DNAJC16Q9Y2G8 782 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 APCP25054 2843 aa11.57□□□□□ -0.56
IRF9-213ENST00000561342 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
IRF9-213ENST00000561342 PMPCBO75439 489 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 MT-CYBP00156 380 aaPredicted RBP11.56□□□□□ -0.56
IRF9-213ENST00000561342 SLC4A1P02730 911 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 PYGMP11217 842 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 HLA-DPA1P20036 260 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 RPL10P27635 214 aaKnown RBP11.56□□□□□ -0.56
IRF9-213ENST00000561342 PTGER4P35408 488 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 SPAM1P38567 509 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 SEPHS1P49903 392 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 CCL11P51671 97 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 ACY1Q03154 408 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 ZRSR2Q15696 482 aaKnown RBP11.56□□□□□ -0.56
IRF9-213ENST00000561342 CHRNA6Q15825 494 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 SEPT7Q16181 437 aaKnown RBP11.56□□□□□ -0.56
IRF9-213ENST00000561342 TAZQ16635 292 aa11.56□□□□□ -0.56
IRF9-213ENST00000561342 PLA2G4EQ3MJ16 856 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms