RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SLC9A2Q9UBY0 812 aa3.9□□□□□ -1.79
CHD8-212ENST00000557329 PIN4Q9Y237 131 aaKnown RBP3.9□□□□□ -1.79
CHD8-212ENST00000557329 DNAJC16Q9Y2G8 782 aa3.9□□□□□ -1.79
CHD8-212ENST00000557329 NEUROG3Q9Y4Z2 214 aa3.9□□□□□ -1.79
CHD8-212ENST00000557329 ZFP37Q9Y6Q3 630 aaPredicted RBP3.9□□□□□ -1.79
CHD8-212ENST00000557329 SMG1Q96Q15 3661 aaKnown RBP3.9□□□□□ -1.79
CHD8-212ENST00000557329 MYH6P13533 1939 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 A0A0U1RQF3 1178 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 C17orf113A0A1B0GUU1 675 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ARHGAP10A1A4S6 786 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 STX16-NPEPL1H3BU86 382 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 STX16O14662 325 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ZBTB5O15062 677 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ITM2AO43736 263 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 SLC28A2O43868 658 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 DDHD2O94830 711 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 FGF3P11487 239 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 DAOP14920 347 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ZNF8P17098 575 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 PTPN2P17706 415 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 CD58P19256 250 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 RXRAP19793 462 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 PPP3CCP48454 512 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 DHPSP49366 369 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 ARPP19P56211 112 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 TRAF1Q13077 416 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 KEAP1Q14145 624 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 TUBB8Q3ZCM7 444 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 KLHL22Q53GT1 634 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 TAF1BQ53T94 588 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 NADSYN1Q6IA69 706 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 CAPRIN2Q6IMN6 1127 aaKnown RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 TMEM71Q6P5X7 295 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 CATSPER4Q7RTX7 472 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 PRSS45Q7RTY3 260 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 SPEM1Q8N4L4 309 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 SETD9Q8NE22 299 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 DNAAF1Q8NEP3 725 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 TNIP2Q8NFZ5 429 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 OR4N2Q8NGD1 307 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ZNF707Q96C28 371 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 INPP4AQ96PE3 977 aaPredicted RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 UBAC1Q9BSL1 405 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 APOL6Q9BWW8 343 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 CLMPQ9H6B4 373 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 ZNF302Q9NR11 478 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 MAP3K20Q9NYL2 800 aaKnown RBP3.89□□□□□ -1.79
CHD8-212ENST00000557329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD8-212ENST00000557329 PTGDR2Q9Y5Y4 395 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 DOCK8Q8NF50 2099 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 LAMA5O15230 3695 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 TICRRQ7Z2Z1 1910 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
CHD8-212ENST00000557329 PATJQ8NI35 1801 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 IGHV4-28A0A0C4DH34 117 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 LNP1A1A4G5 178 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 CLEC18AA5D8T8 446 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 VWA3AA6NCI4 1184 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 SH2D7A6NKC9 451 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 BECN2A8MW95 431 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 EBAG9O00559 213 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 EXTL3O43909 919 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 SERPINI2O75830 405 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 LYL1P12980 280 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 TDGF1P13385 188 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 CSRP1P21291 193 aaKnown RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 ELF1P32519 619 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PSMC2P35998 433 aaKnown RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 HALP42357 657 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PCYT1AP49585 367 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PEX5P50542 639 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 VAMP2P63027 116 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 IRX4P78413 519 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD8-212ENST00000557329 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PON2Q15165 354 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 AP5B1Q2VPB7 878 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 EDRF1Q3B7T1 1238 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 WDR45BQ5MNZ6 344 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PRSS55Q6UWB4 352 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 BBS12Q6ZW61 710 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 TRILQ7L0X0 811 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PLPPR4Q7Z2D5 763 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 DENND6AQ8IWF6 608 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 ANKRD42Q8N9B4 389 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 CLEC18CQ8NCF0 446 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 CNOT9Q92600 299 aaKnown RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 COG8Q96MW5 612 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 DUX5Q96PT3 197 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 PCYT2Q99447 389 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 NUSAP1Q9BXS6 441 aaKnown RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 GCOM2Q9BZD3 368 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 MAF1Q9H063 256 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 RNF41Q9H4P4 317 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 C6orf106Q9H6K1 298 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 RMI1Q9H9A7 625 aa3.88□□□□□ -1.79
CHD8-212ENST00000557329 ZNF334Q9HCZ1 680 aaPredicted RBP3.88□□□□□ -1.79
CHD8-212ENST00000557329 C2orf42Q9NWW7 574 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms