RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 FAM49BQ9NUQ9 324 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SEPT10Q9P0V9 454 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 REV1Q9UBZ9 1251 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 PCDHB14Q9Y5E9 798 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 ZCWPW2A0A1B0GU75 182 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 TEX51A0A1B0GUA7 166 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 TRPC5OSA6NMA1 111 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PLD2O14939 933 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 HS6ST1O60243 411 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 FCER2P06734 321 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 TPH1P17752 444 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 DNAJB2P25686 324 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CDH8P55286 799 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 SNX16P57768 344 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 OSTNP61366 133 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 GBX1Q14549 363 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 SYT6Q5T7P8 510 aaPredicted RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 SPESP1Q6UW49 350 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 ENPP6Q6UWR7 440 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CYS1Q717R9 158 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CDH24Q86UP0 819 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 RAB43Q86YS6 212 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 RNF135Q8IUD6 432 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 NLGN2Q8NFZ4 835 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 BARD1Q99728 777 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 TRIM15Q9C019 465 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 MMP27Q9H306 513 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 KAT8Q9H7Z6 458 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 SLC35C2Q9NQQ7 365 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 FARSBQ9NSD9 589 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 CDV3Q9UKY7 258 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 OAS3Q9Y6K5 1087 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 A0A1W2PP18 115 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CABYRO75952 493 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 GDF11O95390 407 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 FHP07954 510 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PFKLP17858 780 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CSTF2P33240 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
RTN3-208ENST00000537981 EVI2BP34910 448 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 TGM4P49221 684 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 JAG1P78504 1218 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PLIN5Q00G26 463 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PCBP1Q15365 356 aaKnown RBP eCLIP10.54□□□□□ -0.729e-12■■□□□ 13.5
RTN3-208ENST00000537981 MAPRE2Q15555 327 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 C5orf22Q49AR2 442 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CERCAMQ5T4B2 595 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CUZD1Q86UP6 607 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PAPD5Q8NDF8 572 aaKnown RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 BEST2Q8NFU1 509 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 TESCQ96BS2 214 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 CEP170P1Q96L14 293 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 DNAI2Q9GZS0 605 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 MS4A7Q9GZW8 240 aaPredicted RBP10.54□□□□□ -0.72
RTN3-208ENST00000537981 ABCG4Q9H172 646 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 OR51E2Q9H255 320 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 ST6GALNAC4Q9H4F1 302 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 PCDHGB3Q9Y5G1 929 aa10.54□□□□□ -0.72
RTN3-208ENST00000537981 G3V2T6 193 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 DHX15O43143 795 aaKnown RBP10.53□□□□□ -0.72
RTN3-208ENST00000537981 AIREO43918 545 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
RTN3-208ENST00000537981 CNTN5O94779 1100 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 SLC10A3P09131 477 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 FCGR1AP12314 374 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 PSMA3P25788 255 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 TNFSF9P41273 254 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 SLC35A2P78381 396 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 RAD51Q06609 339 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ENPEPQ07075 957 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 NFIAQ12857 509 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
RTN3-208ENST00000537981 BTN1A1Q13410 526 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 SEMA3AQ14563 771 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 USP10Q14694 798 aaKnown RBP10.53□□□□□ -0.72
RTN3-208ENST00000537981 ACOX1Q15067 660 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 POU4F3Q15319 338 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ZNF691Q5VV52 312 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ARHGAP17Q68EM7 881 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ARSKQ6UWY0 536 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 CFAP77Q6ZQR2 320 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 LARP4Q71RC2 724 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTN3-208ENST00000537981 UBA3Q8TBC4 463 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 TWNKQ96RR1 684 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 VAT1Q99536 393 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 SNRNP25Q9BV90 132 aaKnown RBP10.53□□□□□ -0.72
RTN3-208ENST00000537981 AKTIPQ9H8T0 292 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ZNF556Q9HAH1 456 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 PDLIM7Q9NR12 457 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ADGRA2Q96PE1 1338 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 ARPC4-TTLL3A0A0A6YYG9 625 aa10.53□□□□□ -0.72
RTN3-208ENST00000537981 LOC110117498-PIK3R3F6TDL0 507 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms