RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 SLC13A3Q8WWT9 602 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 THAP11Q96EK4 314 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 MBOAT4Q96T53 435 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 OSBPL10Q9BXB5 764 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 NAA50Q9GZZ1 169 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 CRISPLD1Q9H336 500 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 MAGIXQ9H6Y5 334 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 HPS4Q9NQG7 708 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 DNAJB9Q9UBS3 223 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 AGO1Q9UL18 857 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 RAI2Q9Y5P3 530 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 TRBV5-3A0A0A0MS03 114 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 MAGEB3O15480 346 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 FZD6O60353 706 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 NOL3O60936 208 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 WDR47O94967 919 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CELF2O95319 508 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 RETP07949 1114 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 MTHFRP42898 656 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 YAP1P46937 504 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 OR1G1P47890 313 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CHRNB3Q05901 458 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CACNG1Q06432 222 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 MAD2L1Q13257 205 aaPredicted RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 GTF2H2Q13888 395 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 PLCL1Q15111 1095 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 NEDD8Q15843 81 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 TTC23Q5W5X9 447 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 GTF2H2CQ6P1K8 395 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 IL27RAQ6UWB1 636 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CERS6Q6ZMG9 384 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 RASAL3Q86YV0 1011 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 ZDHHC13Q8IUH4 622 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 FAM126BQ8IXS8 530 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 C8orf59Q8N0T1 100 aaPredicted RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 LPCAT1Q8NF37 534 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 METTL6Q8TCB7 284 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 SLC22A17Q8WUG5 538 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 TRUB1Q8WWH5 349 aaKnown RBP6.56□□□□□ -1.36
CDH12-203ENST00000517378 OVCA2Q8WZ82 227 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 TRIB2Q92519 343 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 SNX19Q92543 992 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 GTF2H4Q92759 462 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 PLD4Q96BZ4 506 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 NRBF2Q96F24 287 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 PPM1MQ96MI6 270 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 TOR3AQ9H497 397 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 VAPAQ9P0L0 249 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 GNPTGQ9UJJ9 305 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 DNMT3LQ9UJW3 386 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 OARD1Q9Y530 152 aa6.56□□□□□ -1.36
CDH12-203ENST00000517378 GOLGA8CPA6NN73 597 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 FAM220BPB1ANY3 271 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 E5RI56 91 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 G3V2T6 193 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 ZSCAN9O15535 394 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 ARHGEF15O94989 841 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 SCELO95171 688 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 HTR1AP08908 422 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 COL6A1P12109 1028 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 HOXB9P17482 250 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 CASP2P42575 452 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 CD97P48960 835 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 SLC11A2P49281 568 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 HNRNPFP52597 415 aaKnown RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 TRAF2Q12933 501 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 TOP3AQ13472 1001 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 IL18R1Q13478 541 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 ABRAXAS2Q15018 415 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 NR6A1Q15406 480 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 KCNA10Q16322 511 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 NKG7Q16617 165 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 AP5B1Q2VPB7 878 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 ANKDD1AQ495B1 522 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 RFTN2Q52LD8 501 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 ZC3H12BQ5HYM0 836 aaKnown RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 OTUD3Q5T2D3 398 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 MFSD14CQ5VZR4 134 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 SULT1C3Q6IMI6 304 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 NCEH1Q6PIU2 408 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 ZNF783Q6ZMS7 281 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 LINC00299Q6ZSB3 139 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 TRIM46Q7Z4K8 759 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 RALGPS2Q86X27 583 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 MSRB3Q8IXL7 192 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 CHDHQ8NE62 594 aaPredicted RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 OR2T12Q8NG77 320 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 CHPT1Q8WUD6 406 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 ZNF566Q969W8 418 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 FKBP10Q96AY3 582 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 TBC1D20Q96BZ9 403 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 PLEKHA8Q96JA3 519 aa6.55□□□□□ -1.36
CDH12-203ENST00000517378 RBM4BQ9BQ04 359 aaKnown RBP6.55□□□□□ -1.36
CDH12-203ENST00000517378 BCL7BQ9BQE9 202 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms