RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 COPG2Q9UBF2 871 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 COPG1Q9Y678 874 aaKnown RBP9.65□□□□□ -0.86
SND1-213ENST00000486037 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.86
SND1-213ENST00000486037 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 CFAP69A5D8W1 941 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 WASH4PA8MWX3 477 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 H7C0C1 242 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 FGF10O15520 208 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 RAMP2O60895 175 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 NADKO95544 446 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 KRT14P02533 472 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 C9P02748 559 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 ZSCAN5DPP0CG00 497 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RHOQP17081 205 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 IVDP26440 423 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 CA5AP35218 305 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 ETFBP38117 255 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RPL21P46778 160 aaKnown RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 ATP5OP48047 213 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 NR2C2P49116 596 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 MAPKAPK2P49137 400 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 XRCC4Q13426 336 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 PTPRRQ15256 657 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 PPP1R7Q15435 360 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 TRIP13Q15645 432 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 PYCR3Q53H96 274 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 TMCO4Q5TGY1 634 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 LCN10Q6JVE6 187 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 PWWP2BQ6NUJ5 590 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 DARS2Q6PI48 645 aaKnown RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 FBXO38Q6PIJ6 1188 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 BRAT1Q6PJG6 821 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RFLNAQ6ZTI6 216 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 SYDE1Q6ZW31 735 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 MARK2Q7KZI7 788 aaKnown RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 SYVN1Q86TM6 617 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 CUZD1Q86UP6 607 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 ZNF354CQ86Y25 554 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 ARHGAP12Q8IWW6 846 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 IFT20Q8IY31 132 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RTL3Q8N8U3 475 aaKnown RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 ITLN2Q8WWU7 325 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 SCARF2Q96GP6 870 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 TMEM121Q9BTD3 319 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RAB17Q9H0T7 212 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 ZBTB20Q9HC78 741 aaPredicted RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 SARS2Q9NP81 518 aaKnown RBP9.64□□□□□ -0.87
SND1-213ENST00000486037 GPR83Q9NYM4 423 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 GRHL1Q9NZI5 618 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 B4GALT6Q9UBX8 382 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 TBC1D29Q9UFV1 150 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 HPCAL4Q9UM19 191 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 B3GNT3Q9Y2A9 372 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 SNX24Q9Y343 169 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 CSAG2Q9Y5P2 127 aa9.64□□□□□ -0.87
SND1-213ENST00000486037 MASP2O00187 686 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 TMEM63AO94886 807 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 GAS8O95995 478 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 SOD1P00441 154 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 TUBBP07437 444 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 TYRP1P17643 537 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 LPOP22079 712 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 RBL1P28749 1068 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 ECHS1P30084 290 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 ETV3P41162 512 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 GLRBP48167 497 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 VPS41P49754 854 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 DRG2P55039 364 aaKnown RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 PER3P56645 1201 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 GALNT2Q10471 571 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 IL11RAQ14626 422 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 BRD3Q15059 726 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 PRKD1Q15139 912 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 CNGA3Q16281 694 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
SND1-213ENST00000486037 INO80DQ53TQ3 878 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 DENND2CQ68D51 928 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 IYDQ6PHW0 289 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 ZDHHC24Q6UX98 284 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 GSTA5Q7RTV2 222 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 HSD11B1LQ7Z5J1 315 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 CDH24Q86UP0 819 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 KCNMB4Q86W47 210 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 CDKL3Q8IVW4 592 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 FAM71DQ8N9W8 422 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 IFT81Q8WYA0 676 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 ECHDC3Q96DC8 303 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 CELF6Q96J87 481 aaKnown RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 CATSPERBQ9H7T0 1116 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 PCDH9Q9HC56 1237 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 FAM114A2Q9NRY5 505 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 ASIC3Q9UHC3 531 aa9.63□□□□□ -0.87
SND1-213ENST00000486037 FEZ2Q9UHY8 353 aaPredicted RBP9.63□□□□□ -0.87
SND1-213ENST00000486037 NFU1Q9UMS0 254 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms