RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 DDIASQ8IXT1 998 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 BEND7Q8N7W2 519 aaPredicted RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 CXorf40AQ8TE69 158 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ZNF382Q96SR6 550 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 EPS15L1Q9UBC2 864 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 BAIAP2L1Q9UHR4 511 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ZFC3H1O60293 1989 aaKnown RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 ATP6AP2A0A1C7CYW4 349 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 UBDO15205 165 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ATP6AP2O75787 350 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 MPC1LP0DKB6 136 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 PGM1P36871 562 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 HSPA7P48741 367 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 GALK1P51570 392 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 CNTN1Q12860 1018 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 RIPK1Q13546 671 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 CUL3Q13618 768 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 HTR4Q13639 388 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 RAET1GQ6H3X3 334 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 CACUL1Q86Y37 369 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 RAB7BQ96AH8 199 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 C3orf30Q96M34 536 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 NECTIN4Q96NY8 510 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 P2RY13Q9BPV8 354 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 NUSAP1Q9BXS6 441 aaKnown RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 MMADHCQ9H3L0 296 aaPredicted RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 MRGBPQ9NV56 204 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ZNF225Q9UK10 706 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 PTGDR2Q9Y5Y4 395 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 TAPBPO15533 448 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 GPC4O75487 556 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SOD1P00441 154 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 C8GP07360 202 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 UROSP10746 265 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 THRAP10827 490 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 CPOXP36551 454 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 PKNOX1P55347 436 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SEC13P55735 322 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 ENPP2Q13822 863 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SNCBQ16143 134 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 UBE2R2Q712K3 238 aaPredicted RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 LARP4Q71RC2 724 aaKnown RBP eCLIP16.4■□□□□ 0.221e-10■■■□□ 15.9
CTSA-207ENST00000484855 EFL1Q7Z2Z2 1120 aaKnown RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 VRK3Q8IV63 474 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 RASGEF1AQ8N9B8 481 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SMRP1Q8NCR6 262 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 RHBDF1Q96CC6 855 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 BTRCQ9Y297 605 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 TIMM22Q9Y584 194 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 MTCH2Q9Y6C9 303 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 CHEK2O96017 543 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 ARL1P40616 181 aaPredicted RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 TNFRSF4P43489 277 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 GPR1P46091 355 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 CTSCP53634 463 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 CREB5Q02930 508 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 TMEM115Q12893 351 aaPredicted RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 SQLEQ14534 574 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 E2F5Q15329 346 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 PIP5KL1Q5T9C9 394 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 MBOAT1Q6ZNC8 495 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 SNX32Q86XE0 403 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 OR52B6Q8NGF0 335 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 RP9Q8TA86 221 aaKnown RBP16.4■□□□□ 0.22
CTSA-207ENST00000484855 UBTD2Q8WUN7 234 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 TUBB1Q9H4B7 451 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 AKTIPQ9H8T0 292 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 FADS3Q9Y5Q0 445 aa16.4■□□□□ 0.22
CTSA-207ENST00000484855 NPC1O15118 1278 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 MID1O15344 667 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 TNRC18O15417 2968 aaPredicted RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 TSPAN6O43657 245 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 RNASEH1O60930 286 aaKnown RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 ATG13O75143 517 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 OR4F21O95013 312 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 ANXA5P08758 320 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 ENO2P09104 434 aaPredicted RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 TIE1P35590 1138 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 RPIAP49247 311 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 PRLHRP49683 370 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 SLC25A3Q00325 362 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 CDC16Q13042 620 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 SP140Q13342 867 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 CYLC2Q14093 348 aaPredicted RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 HERC3Q15034 1050 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 CST6Q15828 149 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 ASZ1Q8WWH4 475 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 RTKNQ9BST9 563 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 CD244Q9BZW8 370 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 RSPH9Q9H1X1 276 aaPredicted RBP16.39■□□□□ 0.21
CTSA-207ENST00000484855 ARL15Q9NXU5 204 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 OPTCQ9UBM4 332 aa16.39■□□□□ 0.21
CTSA-207ENST00000484855 FAM8A1Q9UBU6 413 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms