RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 RAB39AQ14964 217 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZNF773Q6PK81 442 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 MILR1Q7Z6M3 343 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 SAPCD2Q86UD0 394 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 RALGPS2Q86X27 583 aaPredicted RBP24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 AURKBQ96GD4 344 aaPredicted RBP24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 CLPBQ9H078 707 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 IPPKQ9H8X2 491 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 GNPTGQ9UJJ9 305 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 USP22Q9UPT9 525 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 CLIC3O95833 236 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 ALPLP05186 524 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 AKT1P31749 480 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 KCTD8Q6ZWB6 473 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 UBTD2Q8WUN7 234 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZNF583Q96ND8 569 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 FAM126AQ9BYI3 521 aaPredicted RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 GPR63Q9BZJ6 419 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 IFT80Q9P2H3 777 aaPredicted RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 FAF1Q9UNN5 650 aaPredicted RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 POLR3HQ9Y535 204 aaPredicted RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 H3BMQ9 156 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 THRBP10828 461 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 ARL1P40616 181 aaPredicted RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 SGSHP51688 502 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 CTBSQ01459 385 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 LYPLAL1Q5VWZ2 237 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 PTRHD1Q6GMV3 140 aaKnown RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC8B1Q6J4K2 584 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 TBPL2Q6SJ96 375 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 RBFAQ8N0V3 343 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 DNAJB8Q8NHS0 232 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC13A3Q8WWT9 602 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 RPL10LQ96L21 214 aaKnown RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 COG8Q96MW5 612 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 MRPL9Q9BYD2 267 aaKnown RBP24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 STOML2Q9UJZ1 356 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 CDC14AQ9UNH5 594 aa24.22■■□□□ 1.47
SYNGAP1-206ENST00000479510 CASP8AP2Q9UKL3 1982 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 THSD7BQ9C0I4 1608 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 H0Y858 1186 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 HOXA2O43364 376 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 KATNA1O75449 491 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 ARHGEF15O94989 841 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 MTPNP58546 118 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 AP1S1P61966 158 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 TUBA3CQ13748 450 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 ABRAXAS2Q15018 415 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 PYCR3Q53H96 274 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 DCBLD1Q8N8Z6 715 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 TMBIM1Q969X1 311 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 TLR9Q9NR96 1032 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 NEUROG3Q9Y4Z2 214 aa24.21■■□□□ 1.47
SYNGAP1-206ENST00000479510 LATS1O95835 1130 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 IL6P05231 212 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 DGKAP23743 735 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 RANBP1P43487 201 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SELPLGQ14242 412 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 RFTN2Q52LD8 501 aaPredicted RBP24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 RBM48Q5RL73 367 aaKnown RBP24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 TTC23Q5W5X9 447 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SULT1C3Q6IMI6 304 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SVOPLQ8N434 492 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC43A3Q8NBI5 491 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 FBXO22Q8NEZ5 403 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 OR2T12Q8NG77 320 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 FNDC8Q8TC99 324 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SDCCAG3Q96C92 435 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 TRPM5Q9NZQ8 1165 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 DNAJB9Q9UBS3 223 aa24.2■■□□□ 1.47
SYNGAP1-206ENST00000479510 SH3PXD2BA1X283 911 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 GALTP07902 379 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 PCSK2P16519 638 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 TM4SF4P48230 202 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 TWF1Q12792 350 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 MYBPC3Q14896 1274 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 TRIM46Q7Z4K8 759 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 C17orf80Q9BSJ5 609 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 USE1Q9NZ43 259 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 CROCCQ5TZA2 2017 aa24.2■■□□□ 1.46
SYNGAP1-206ENST00000479510 TMEM88BA6NKF7 163 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 IQCF5A8MTL0 148 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 PFDN1O60925 122 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 NOL3O60936 208 aaKnown RBP24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 SCELO95171 688 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 TMBIM6P55061 237 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 RAB15P59190 212 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 HABP4Q5JVS0 413 aaKnown RBP24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 ARMC12Q5T9G4 340 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 ZDHHC13Q8IUH4 622 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 OR13F1Q8NGS4 319 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 TSEN34Q9BSV6 310 aaKnown RBP24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 KLF16Q9BXK1 252 aaPredicted RBP24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 CIPCQ9C0C6 399 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 PIF1Q9H611 641 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 TRPS1Q9UHF7 1281 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 FNDC3AQ9Y2H6 1198 aaKnown RBP24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 PCDHB9Q9Y5E1 797 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 ATE1O95260 518 aa24.19■■□□□ 1.46
SYNGAP1-206ENST00000479510 MT-ND1P03886 318 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms