RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GDF6Q6KF10 455 aaPredicted RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 QSOX2Q6ZRP7 698 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 MSANTD1Q6ZTZ1 278 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 SATL1Q86VE3 508 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 LNX1Q8TBB1 728 aaPredicted RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 OVCA2Q8WZ82 227 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 SLC38A4Q969I6 547 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 P2RY11Q96G91 374 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 LDAHQ9H6V9 325 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CRTAC1Q9NQ79 661 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 PNPLA3Q9NST1 481 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CLDND1Q9NY35 253 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 UPB1Q9UBR1 384 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 FADS2P1A8MWK0 482 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 B4DGG1 531 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 H0YGN5 161 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TNFRSF11BO00300 401 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NOS1APO75052 506 aaPredicted RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 EPHA3P29320 983 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CCNFP41002 786 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 PDK3Q15120 406 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TMEM220Q6QAJ8 160 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NANOGNBQ7Z5D8 188 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 C2orf15Q8WU43 125 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 C12orf66Q96MD2 445 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 IL1RAPQ9NPH3 570 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NKIRAS2Q9NYR9 191 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 RAPGEFL1Q9UHV5 662 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 L1RE1Q9UN81 338 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ATP6AP2A0A1C7CYW4 349 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CPED1A4D0V7 1026 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ZNF726A6NNF4 738 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 IQCF5A8MTL0 148 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ATP6AP2O75787 350 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 SERPINA3P01011 423 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ZNF20P17024 532 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 AP3S2P59780 193 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 FMO1Q01740 532 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NT5DC1Q5TFE4 455 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CERS6Q6ZMG9 384 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 OTOP3Q7RTS5 596 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TMEM145Q8NBT3 493 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 WFIKKN2Q8TEU8 576 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NUS1Q96E22 293 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 SLC35G5Q96KT7 338 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 GBA3Q9H227 469 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 PCDH18Q9HCL0 1135 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NWD2Q9ULI1 1742 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CLEC3AO75596 197 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 OR7A10O76100 309 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 VLDLRP98155 873 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 FCHO2Q0JRZ9 810 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 PDSS1Q5T2R2 415 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 EIF1ADQ8N9N8 165 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 ATAD1Q8NBU5 361 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NPAS2Q99743 824 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 RHOJQ9H4E5 214 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 IL36AQ9UHA7 158 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 PRPF19Q9UMS4 504 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 A0A1B0GVM2 712 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 DHFRP00374 187 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 C8GP07360 202 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ARL2P36404 184 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 GDI2P50395 445 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 BBS12Q6ZW61 710 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CHERPQ8IWX8 916 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 OR4C6Q8NH72 309 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 AENQ8WTP8 325 aaKnown RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 RFKQ969G6 155 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 COQ8BQ96D53 544 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 NSMCE3Q96MG7 304 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 KLHL32Q96NJ5 620 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CHCHD6Q9BRQ6 235 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 FGFBP2Q9BYJ0 223 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 PACSIN3Q9UKS6 424 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CDC14AQ9UNH5 594 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 CACNA1FO60840 1977 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 HYKKA2RU49 373 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 INSIG1O15503 277 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 STK16O75716 305 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 METTL18O95568 372 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 IFNW1P05000 195 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 CAPZA1P52907 286 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
HPS4-209ENST00000466781 PERM1Q5SV97 790 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PYHIN1Q6K0P9 492 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 GK5Q6ZS86 529 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ARL14EPQ8N8R7 260 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms