RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 EFCAB7A8K855 629 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PFDN6O15212 129 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 CAPN5O15484 640 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 KLK10O43240 276 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 NDUFS3O75489 264 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 RASSF9O75901 435 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 CCL4P13236 92 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PAMP19021 973 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 ITPKBP27987 946 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 NDUFS1P28331 727 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 NMBRP28336 390 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 ETV5P41161 510 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 TTPAP49638 278 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 BRD3Q15059 726 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 COL28A1Q2UY09 1125 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 SYTL3Q4VX76 610 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PAPD7Q5XG87 772 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 ARMC6Q6NXE6 501 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 IRGCQ6NXR0 463 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PACS1Q6VY07 963 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 SDCCAG8Q86SQ7 713 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 CLEC14AQ86T13 490 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 LILRA3Q8N6C8 439 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 GPR150Q8NGU9 434 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 ZFPM2Q8WW38 1151 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 JPH3Q8WXH2 748 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 CPT1BQ92523 772 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 TAAR9Q96RI9 348 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 KIFC1Q9BW19 673 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 DPH1Q9BZG8 443 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 DDX47Q9H0S4 455 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 MRM3Q9HC36 420 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 XAB2Q9HCS7 855 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 SLC39A1Q9NY26 324 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PDP2Q9P2J9 529 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PCDHGA7Q9Y5G6 932 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 PRSS21Q9Y6M0 314 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 IGF2RP11717 2491 aa17.67■□□□□ 0.42
PDLIM2-215ENST00000456545 MAGEB16A2A368 324 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 SDR42E2A6NKP2 422 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 LIN7AO14910 233 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 NVLO15381 856 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 OR1I1O60431 355 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 AVILO75366 819 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 MAGEA6P43360 314 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 RPA4Q13156 261 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 ANKRD22Q5VYY1 191 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 CAPRIN2Q6IMN6 1127 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 DUS1LQ6P1R4 473 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 CES3Q6UWW8 571 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 ZNF534Q76KX8 674 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 KLHL7Q8IXQ5 586 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 MCUQ8NE86 351 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 SGSM3Q96HU1 749 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 SOX13Q9UN79 622 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 LHX6Q9UPM6 363 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 PCDHB11Q9Y5F2 797 aa17.66■□□□□ 0.42
PDLIM2-215ENST00000456545 ACACAQ13085 2346 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PRAMEF10O60809 474 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 VAPBO95292 243 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 FGF3P11487 239 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 MLNP12872 115 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 ITGB6P18564 788 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PREPP48147 710 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 CD151P48509 253 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 GFERP55789 205 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 BOP1Q14137 746 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 CACHD1Q5VU97 1274 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PTRHD1Q6GMV3 140 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 MRNIPQ6NTE8 343 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 ARHGAP22Q7Z5H3 698 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 LDB1Q86U70 411 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 SPACA3Q8IXA5 215 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PPIL6Q8IXY8 311 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 RSC1A1Q92681 617 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 ART4Q93070 314 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 MFSD3Q96ES6 412 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 RMDN2Q96LZ7 410 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 TREX1Q9NSU2 369 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 OGFRQ9NZT2 677 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 RNF14Q9UBS8 474 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 MAD1L1Q9Y6D9 718 aa17.65■□□□□ 0.42
PDLIM2-215ENST00000456545 PDHA2P29803 388 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 CASQ1P31415 396 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 CAPZBP47756 277 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 SEPHS1P49903 392 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 CSE1LP55060 971 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 PLOD1Q02809 727 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 PRKAA1Q13131 559 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 DCAF12Q5T6F0 453 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 ARMC3Q5W041 872 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 FAM92BQ6ZTR7 304 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 CAND1Q86VP6 1230 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms