RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RHPN2P1A8MT19 583 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 LIN7AO14910 233 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-203ENST00000439080 TRIM16O95361 564 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 ESR1P03372 595 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 SSTR1P30872 391 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 FMO4P31512 558 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 MAGEA4P43358 317 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 CARSP49589 748 aaKnown RBP16.56■□□□□ 0.24
TARDBP-203ENST00000439080 UBE2IP63279 158 aaKnown RBP16.56■□□□□ 0.24
TARDBP-203ENST00000439080 CUL1Q13616 776 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 DHRS13Q6UX07 377 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 NAPRTQ6XQN6 538 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF438Q7Z4V0 828 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 SLC9B2Q86UD5 537 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 TRIM48Q8IWZ4 208 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 PALM2Q8IXS6 379 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 PANX3Q96QZ0 392 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 SARS2Q9NP81 518 aaKnown RBP16.56■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF624Q9P2J8 865 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-203ENST00000439080 CPNE7Q9UBL6 633 aa16.56■□□□□ 0.24
TARDBP-203ENST00000439080 H3BMM5 538 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 PPM1DO15297 605 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 NIPSNAP2O75323 286 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 PNLIPP16233 465 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 CCR7P32248 378 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 MGAT5Q09328 741 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 RPA4Q13156 261 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 NR1D2Q14995 579 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 BRD3Q15059 726 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 TEDDM1Q5T9Z0 273 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 DUS1LQ6P1R4 473 aaKnown RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 KIAA0408Q6ZU52 694 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 SPRED1Q7Z699 444 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF761Q86XN6 746 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 IFT20Q8IY31 132 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 AVL9Q8NBF6 648 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 SPDYE1Q8NFV5 336 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 ADAMTS14Q8WXS8 1223 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 CXorf40BQ96DE9 158 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 OR52A5Q9H2C5 316 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 SYNDIG1Q9H7V2 258 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 POT1Q9NUX5 634 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 IMP3Q9NV31 184 aaKnown RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 MOCS1Q9NZB8 636 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 ZFATQ9P243 1243 aa16.55■□□□□ 0.24
TARDBP-203ENST00000439080 CFAP20Q9Y6A4 193 aaKnown RBP16.55■□□□□ 0.24
TARDBP-203ENST00000439080 TCRBV9S1A1TA0A576 114 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CASC3O15234 703 aaKnown RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 VIPP01282 170 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 MTHFD1P11586 935 aaKnown RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CDK4P11802 303 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 PKMP14618 531 aaKnown RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 XRCC1P18887 633 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 PDHA2P29803 388 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 SLC19A1P41440 591 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 LEPRP48357 1165 aaKnown RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CSE1LP55060 971 aaKnown RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 GPX6P59796 221 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 TMED2Q15363 201 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 RPE65Q16518 533 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CNSTQ6PJW8 725 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CEP128Q6ZU80 1094 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 PDZD3Q86UT5 571 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 Q8N9G6 341 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-203ENST00000439080 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 FAM136AQ96C01 138 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 C12orf66Q96MD2 445 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 CCDC68Q9H2F9 335 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 NFU1Q9UMS0 254 aa16.54■□□□□ 0.24
TARDBP-203ENST00000439080 SLC5A10A0PJK1 596 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 E5RI56 91 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 OPA1O60313 960 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 HAUS5O94927 633 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 RPLP0P05388 317 aaKnown RBP16.53■□□□□ 0.24
TARDBP-203ENST00000439080 GSTA2P09210 222 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 AOAHP28039 575 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 ABCG1P45844 678 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 CLDN6P56747 220 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 E2F1Q01094 437 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 INSM1Q01101 510 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-203ENST00000439080 HSPA14Q0VDF9 509 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 FOXC1Q12948 553 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF549Q6P9A3 640 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 ZNF449Q6P9G9 518 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-203ENST00000439080 GALNT7Q86SF2 657 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 INSM2Q96T92 566 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-203ENST00000439080 SLC38A3Q99624 504 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 ABCG4Q9H172 646 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 LRRC4CQ9HCJ2 640 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 WDFY3Q8IZQ1 3526 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 UNC13CQ8NB66 2214 aa16.53■□□□□ 0.24
TARDBP-203ENST00000439080 PRAMEF33A0A0G2JMD5 474 aa16.52■□□□□ 0.24
TARDBP-203ENST00000439080 IFRD1O00458 451 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-203ENST00000439080 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.24
TARDBP-203ENST00000439080 APOA4P06727 396 aa16.52■□□□□ 0.24
TARDBP-203ENST00000439080 GABRB3P28472 473 aa16.52■□□□□ 0.24
TARDBP-203ENST00000439080 GPR3P46089 330 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms