RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 MAGEA4P43358 317 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 PREPP48147 710 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 UBE2IP63279 158 aaKnown RBP21.22■□□□□ 0.99
SEC22C-207ENST00000423701 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.22■□□□□ 0.99
SEC22C-207ENST00000423701 TEDDM1Q5T9Z0 273 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 NAPRTQ6XQN6 538 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 SLC9B2Q86UD5 537 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 PALM2Q8IXS6 379 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 SPDYE1Q8NFV5 336 aaPredicted RBP21.22■□□□□ 0.99
SEC22C-207ENST00000423701 ADAMTS14Q8WXS8 1223 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 RMDN2Q96LZ7 410 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 MOCS1Q9NZB8 636 aa21.22■□□□□ 0.99
SEC22C-207ENST00000423701 LIN7AO14910 233 aaPredicted RBP21.21■□□□□ 0.99
SEC22C-207ENST00000423701 CASC3O15234 703 aaKnown RBP21.21■□□□□ 0.99
SEC22C-207ENST00000423701 CDK4P11802 303 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 PNLIPP16233 465 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 XRCC1P18887 633 aaPredicted RBP21.21■□□□□ 0.99
SEC22C-207ENST00000423701 RPA4Q13156 261 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 CUL1Q13616 776 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 NR1D2Q14995 579 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 BRD3Q15059 726 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 KIAA0408Q6ZU52 694 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 AVL9Q8NBF6 648 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 PANX3Q96QZ0 392 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 FMO2Q99518 471 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 OR52A5Q9H2C5 316 aa21.21■□□□□ 0.99
SEC22C-207ENST00000423701 STN1Q9H668 368 aaKnown RBP21.21■□□□□ 0.99
SEC22C-207ENST00000423701 SLC5A10A0PJK1 596 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 H3BMM5 538 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 NIPSNAP2O75323 286 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 HAUS5O94927 633 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 PKMP14618 531 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 PDHA2P29803 388 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 LEPRP48357 1165 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 GPX6P59796 221 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 E2F1Q01094 437 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 MGAT5Q09328 741 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 RPE65Q16518 533 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 SYTL3Q4VX76 610 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 CAPRIN2Q6IMN6 1127 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 CNSTQ6PJW8 725 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 SPRED1Q7Z699 444 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 RAB44Q7Z6P3 723 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 ZNF761Q86XN6 746 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 TRIM48Q8IWZ4 208 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 IFT20Q8IY31 132 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 CXorf40BQ96DE9 158 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 C12orf66Q96MD2 445 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 POT1Q9NUX5 634 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 ZFATQ9P243 1243 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 CFAP20Q9Y6A4 193 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 OPA1O60313 960 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 VIPP01282 170 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 MTHFD1P11586 935 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 GABRB3P28472 473 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 INSM1Q01101 510 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 DUS1LQ6P1R4 473 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 ZNF549Q6P9A3 640 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 Q8N9G6 341 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 INSM2Q96T92 566 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 ABCG4Q9H172 646 aa21.2■□□□□ 0.98
SEC22C-207ENST00000423701 IMP3Q9NV31 184 aaKnown RBP21.2■□□□□ 0.98
SEC22C-207ENST00000423701 PRAMEF33A0A0G2JMD5 474 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 TCRBV9S1A1TA0A576 114 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 GSTA2P09210 222 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 AOAHP28039 575 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 CSE1LP55060 971 aaKnown RBP21.19■□□□□ 0.98
SEC22C-207ENST00000423701 CLDN6P56747 220 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 FOXC1Q12948 553 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 ZNF449Q6P9G9 518 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 C3orf62Q6ZUJ4 267 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 GALNT7Q86SF2 657 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 PDZD3Q86UT5 571 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 CHCHD4Q8N4Q1 142 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 TMEM159Q96B96 161 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 FAM136AQ96C01 138 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 CCDC68Q9H2F9 335 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 LRRC4CQ9HCJ2 640 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 SLC40A1Q9NP59 571 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 NFU1Q9UMS0 254 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 CDYLQ9Y232 598 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 RP1P56715 2156 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 ASXL3Q9C0F0 2248 aa21.19■□□□□ 0.98
SEC22C-207ENST00000423701 COL27A1Q8IZC6 1860 aaPredicted RBP21.18■□□□□ 0.98
SEC22C-207ENST00000423701 CACNA1AO00555 2505 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 A0A1W2PQM1 296 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 GPC4O75487 556 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 AHSGP02765 367 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 RPLP0P05388 317 aaKnown RBP21.18■□□□□ 0.98
SEC22C-207ENST00000423701 APOA4P06727 396 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 ADRB1P08588 477 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 ALDH4A1P30038 563 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 ABCG1P45844 678 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 GPR3P46089 330 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 OR1D5P58170 312 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 PLOD1Q02809 727 aaPredicted RBP21.18■□□□□ 0.98
SEC22C-207ENST00000423701 HSPA14Q0VDF9 509 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 HES3Q5TGS1 186 aa21.18■□□□□ 0.98
SEC22C-207ENST00000423701 CEP128Q6ZU80 1094 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms