RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 Q8N9G6 341 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 GSDMBQ8TAX9 411 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 PYROXD1Q8WU10 500 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 BIRC8Q96P09 236 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 FOXP3Q9BZS1 431 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 SYNDIG1Q9H7V2 258 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 SARS2Q9NP81 518 aaKnown RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 CPNE7Q9UBL6 633 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 CFAP20Q9Y6A4 193 aaKnown RBP13.66□□□□□ -0.22
CPNE1-206ENST00000412056 BPTFQ12830 3046 aa13.66□□□□□ -0.22
CPNE1-206ENST00000412056 DNAH14Q0VDD8 3507 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 A0A1W2PQM1 296 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 SLC5A10A0PJK1 596 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 LIN7AO14910 233 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 SLC35G4P0C7Q5 338 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 PNLIPP16233 465 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 ECHS1P30084 290 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 SSTR1P30872 391 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 CCR7P32248 378 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 E2F1Q01094 437 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 FRG1Q14331 258 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 NR1D2Q14995 579 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 RPE65Q16518 533 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 SYTL3Q4VX76 610 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 DUS1LQ6P1R4 473 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 CNSTQ6PJW8 725 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 CNTN4Q8IWV2 1026 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 TRIM48Q8IWZ4 208 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 CXorf40BQ96DE9 158 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 C12orf66Q96MD2 445 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 PANX3Q96QZ0 392 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 INSM2Q96T92 566 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 FAM129AQ9BZQ8 928 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 OR52A5Q9H2C5 316 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 POT1Q9NUX5 634 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 IMP3Q9NV31 184 aaKnown RBP13.65□□□□□ -0.22
CPNE1-206ENST00000412056 VPS9D1Q9Y2B5 631 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 KNTC1P50748 2209 aa13.65□□□□□ -0.22
CPNE1-206ENST00000412056 ANKRD12Q6UB98 2062 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 NTN3O00634 580 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 B4GAT1O43505 415 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 HAUS5O94927 633 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 VIPP01282 170 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ESR1P03372 595 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MTHFD1P11586 935 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 CDK4P11802 303 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 PKMP14618 531 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 SPINK2P20155 84 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ALDH4A1P30038 563 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MAGEA4P43358 317 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ABCG1P45844 678 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 LEPRP48357 1165 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ADARP55265 1226 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 OR1D5P58170 312 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 GPX6P59796 221 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MGAT5Q09328 741 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 TEDDM1Q5T9Z0 273 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 CAPRIN2Q6IMN6 1127 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ERMP1Q7Z2K6 904 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 VRK3Q8IV63 474 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 SPNS2Q8IVW8 549 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 PALM2Q8IXS6 379 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 AVL9Q8NBF6 648 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 FAM136AQ96C01 138 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 LRRN3Q9H3W5 708 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 SMYD2Q9NRG4 433 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MOCS1Q9NZB8 636 aa13.64□□□□□ -0.23
CPNE1-206ENST00000412056 MTRF1LQ9UGC7 380 aaKnown RBP13.64□□□□□ -0.23
CPNE1-206ENST00000412056 FAM149AA5PLN7 773 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 H3BMM5 538 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 PIAS1O75925 651 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 APOA4P06727 396 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 AOAHP28039 575 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 GABRB3P28472 473 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 GPR3P46089 330 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 HSPA14Q0VDF9 509 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 RPA4Q13156 261 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms