RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NUSAP1Q9BXS6 441 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CD207Q9UJ71 328 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CNOT6Q9ULM6 557 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 STK38LQ9Y2H1 464 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 A0A1B0GTL3 188 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 SLC16A5O15375 505 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 GSC2O15499 205 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 TAPBPO15533 448 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 AP1G1O43747 822 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 RNASEH1O60930 286 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 GPC4O75487 556 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ADH1BP00325 375 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 COPAP53621 1224 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 FOXA1P55317 472 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 PKNOX1P55347 436 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CDKL1Q00532 357 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 BOP1Q14137 746 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ADGRE1Q14246 886 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CST6Q15828 149 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 AAK1Q2M2I8 961 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZNF648Q5T619 568 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 TMEM198Q66K66 360 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 LARP4Q71RC2 724 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 EFL1Q7Z2Z2 1120 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 SYVN1Q86TM6 617 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 RBM15BQ8NDT2 890 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ASZ1Q8WWH4 475 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ELMO1Q92556 727 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ESAMQ96AP7 390 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 RHBDF1Q96CC6 855 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 CATSPER2Q96P56 530 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 SLC12A9Q9BXP2 914 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZNF225Q9UK10 706 aa11.24□□□□□ -0.61
SMARCAL1-203ENST00000392128 OR2AG2A6NM03 316 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GIPC1O14908 333 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 ATG13O75143 517 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 SLCO2B1O94956 709 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GUCA1CO95843 209 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 UROSP10746 265 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 C5AR1P21730 350 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 PIK3R1P27986 724 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CTHP32929 405 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 WASP42768 502 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 RIPK1Q13546 671 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 RBBP7Q16576 425 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 DNAL1Q4LDG9 190 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 AGBL4Q5VU57 503 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GOLGA7Q7Z5G4 137 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 ASB11Q8WXH4 323 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 EGFL8Q99944 293 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 TMEM79Q9BSE2 394 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZCCHC2Q9C0B9 1178 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 MMADHCQ9H3L0 296 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 COPG1Q9Y678 874 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GFYI3L273 518 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 INPP4BO15327 924 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 MID1O15344 667 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 TSPAN6O43657 245 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 SYNCRIPO60506 623 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CRCPO75575 148 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 COX4I1P13073 169 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 TIE1P35590 1138 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GPR1P46091 355 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CTSCP53634 463 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GTF2H2Q13888 395 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 HERC3Q15034 1050 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 BCL7AQ4VC05 210 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 RAET1GQ6H3X3 334 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GTF2H2CQ6P1K8 395 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 TTC23LQ6PF05 361 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 UBE2R2Q712K3 238 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 RASGRP3Q8IV61 690 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 VRK3Q8IV63 474 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CHCHD4Q8N4Q1 142 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 POU5F2Q8N7G0 328 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 BEND7Q8N7W2 519 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 FBXO27Q8NI29 283 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 C3orf30Q96M34 536 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 GABRG3Q99928 467 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 CD244Q9BZW8 370 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 TUBB1Q9H4B7 451 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 PARVBQ9HBI1 364 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 WWOXQ9NZC7 414 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 PDE10AQ9Y233 779 aa11.23□□□□□ -0.61
SMARCAL1-203ENST00000392128 BRWD1Q9NSI6 2320 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 K7ESM1 405 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms