RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ITGA2P17301 1181 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 OSTNP61366 133 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 RBP5P82980 135 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 DMC1Q14565 340 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ODF1Q14990 250 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PIGGQ5H8A4 983 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 RTP2Q5QGT7 225 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 EFCAB12Q6NXP0 572 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 UNC93AQ86WB7 457 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 GALNT12Q8IXK2 581 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 MAPK15Q8TD08 544 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CHAC2Q8WUX2 184 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CIDECQ96AQ7 238 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 MRPL45Q9BRJ2 306 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 TMEM9Q9P0T7 183 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ENPP5Q9UJA9 477 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 AP4E1Q9UPM8 1137 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 MAPRE3Q9UPY8 281 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 EYSQ5T1H1 3165 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 GRAP2O75791 330 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 COX4I1P13073 169 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 ITGALP20701 1170 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 MAP4P27816 1152 aaKnown RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 GRIA3P42263 894 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 LIMK2P53671 638 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SSTP61278 116 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SEMA3BQ13214 749 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 PPP1R3AQ16821 1122 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CDO1Q16878 200 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SPANXN3Q5MJ09 141 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CCDC36Q8IYA8 594 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CXCL16Q9H2A7 254 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 NYNRINQ9P2P1 1898 aaKnown RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 ATXN1P54253 815 aaKnown RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 DSG2Q14126 1118 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 ADGRE1Q14246 886 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 HERC3Q15034 1050 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 LDLRAP1Q5SW96 308 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 PM20D1Q6GTS8 502 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CRYBG2Q8N1P7 616 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SNX31Q8N9S9 440 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CLEC4CQ8WTT0 213 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 COL26A1Q96A83 441 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CCDC124Q96CT7 223 aaKnown RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 SEC22CQ9BRL7 303 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 COG4Q9H9E3 785 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 SNX15Q9NRS6 342 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 ADGRE2Q9UHX3 823 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 CNOT11Q9UKZ1 510 aaKnown RBP10.69□□□□□ -0.7
SND1-201ENST00000354725 DUSP12Q9UNI6 340 aa10.69□□□□□ -0.7
SND1-201ENST00000354725 TRAV20A0A0B4J274 112 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 OR6C74A6NCV1 312 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 DCLK1O15075 740 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 MFSD11O43934 449 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 H2AFYO75367 372 aaKnown RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 SERPINI2O75830 405 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 IFNA16P05015 189 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 SOX6P35712 828 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 GP5P40197 560 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 CLCN3P51790 818 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 ERVK-21P61565 698 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 KLF10Q13118 480 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 DOC2AQ14183 400 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 TOR2AQ5JU69 321 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 MRPL10Q7Z7H8 261 aaKnown RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 NPLQ9BXD5 320 aaPredicted RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 B3GNT5Q9BYG0 378 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 POLE4Q9NR33 117 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 DDX28Q9NUL7 540 aaKnown RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 SYBUQ9NX95 663 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 MRPS7Q9Y2R9 242 aaKnown RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 DGKBQ9Y6T7 804 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 SHROOM3Q8TF72 1996 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 NLRC5Q86WI3 1866 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 PRSS51A0A1B0GVH4 220 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 NOL3O60936 208 aaKnown RBP10.68□□□□□ -0.7
SND1-201ENST00000354725 KERAO60938 352 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 CDK14O94921 469 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 RALBP11234 206 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 PIK3R1P27986 724 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 GSK3AP49840 483 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 PPP2R5DQ14738 602 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 SLC9B1Q4ZJI4 515 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 PPM1JQ5JR12 505 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 VWA5B1Q5TIE3 1220 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 KRT80Q6KB66 452 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 ARSKQ6UWY0 536 aa10.68□□□□□ -0.7
SND1-201ENST00000354725 CARM1Q86X55 608 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms