RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC45A3Q96JT2 553 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 HOPXQ9BPY8 73 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 RPP25Q9BUL9 199 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TDRD1Q9BXT4 1180 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 OSBPL6Q9BZF3 934 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PLA2G2FQ9BZM2 168 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CMTM6Q9NX76 183 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PTBP2Q9UKA9 531 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF510Q9Y2H8 683 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TDRKHQ9Y2W6 561 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 RNF103-CHMP3A0A140T963 221 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SH3PXD2BA1X283 911 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 MROH6A6NGR9 719 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 LRRC14BA6NHZ5 514 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 BBIP1A8MTZ0 92 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ACOX3O15254 700 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CDK14O94921 469 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ATE1O95260 518 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SIX3O95343 332 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SERPINF2P08697 491 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PSMA4P25789 261 aaKnown RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 HERVK_113P63132 956 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PMS2P3Q13401 168 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 C16orf72Q14CZ0 275 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 RAB30Q15771 203 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ANKDD1AQ495B1 522 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TANGO2Q6ICL3 276 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 NCEH1Q6PIU2 408 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF783Q6ZMS7 281 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ZSWIM9Q86XI8 627 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PHYKPLQ8IUZ5 450 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TDHQ8IZJ6 230 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 MINDY1Q8N5J2 469 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 OR13C4Q8NGS5 318 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CALML6Q8TD86 181 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 EXT2Q93063 718 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TSPAN17Q96FV3 270 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 FBXL20Q96IG2 436 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 NPLQ9BXD5 320 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ERVK-6Q9BXR3 956 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PRO3102Q9H379 93 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SFXN1Q9H9B4 322 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 EVLQ9UI08 416 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CRYL1Q9Y2S2 319 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ANKRD12Q6UB98 2062 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF701M0R085 212 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF197O14709 1029 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PIP5K1BO14986 540 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 FGF19O95750 216 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CYP17A1P05093 508 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 HNRNPCP07910 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 POU2F2P09086 479 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 IMPDH2P12268 514 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SRCP12931 536 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 HSD17B1P14061 328 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 IL10P22301 178 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 FASP25445 335 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SLC6A11P48066 632 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SEMG2Q02383 582 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 DHCR24Q15392 516 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ATP6AP1Q15904 470 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 LCN8Q6JVE9 175 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 GPR149Q86SP6 731 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM74Q86UV6 250 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM73Q86UV7 250 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CROCCP3Q8IVE0 287 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ADGRG5Q8IZF4 528 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 OFCC1Q8IZS5 231 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 LEMD2Q8NC56 503 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 OR6P1Q8NGX9 317 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 BLOC1S5Q8TDH9 187 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 LRRC58Q96CX6 371 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CHFRQ96EP1 664 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 FEM1CQ96JP0 617 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 KCNA7Q96RP8 456 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 TUBB1Q9H4B7 451 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 CXorf21Q9HAI6 301 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 PLGRKTQ9HBL7 147 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ACTR3BQ9P1U1 418 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 KIAA1522Q9P206 1035 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-204ENST00000353317 ZNHIT2Q9UHR6 403 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 NDUFAF1Q9Y375 327 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 RAI2Q9Y5P3 530 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 SCN8AQ9UQD0 1980 aa8.48□□□□□ -1.05
TRIM55-204ENST00000353317 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CROCCQ5TZA2 2017 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 A0A1B0GTL3 188 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 H3BMQ9 156 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 EI24O14681 340 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ANGPT2O15123 496 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ARPC2O15144 300 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 FZD6O60353 706 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms