RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 CRY1Q16526 586 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 AP5B1Q2VPB7 878 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 CCDC81Q6ZN84 652 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 LEMD2Q8NC56 503 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 NDNFQ8TB73 568 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 TSPEARQ8WU66 669 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 CCDC97Q96F63 343 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-201ENST00000262395 HEPHQ9BQS7 1158 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 SPON2Q9BUD6 331 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ALOXE3Q9BYJ1 711 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ZFP14Q9HCL3 533 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 FBXO10Q9UK96 956 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 TLR6Q9Y2C9 796 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 SYCE1LA8MT33 242 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 MGEA5O60502 916 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 GUCA1CO95843 209 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 SLC2A4P14672 509 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ITGB6P18564 788 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 HTR7P34969 479 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
TRAF4-201ENST00000262395 OCA2Q04671 838 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ABRAXAS2Q15018 415 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 GLT6D1Q7Z4J2 308 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 THEM5Q8N1Q8 247 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 MDGA1Q8NFP4 955 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 GPR150Q8NGU9 434 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 FAM162AQ96A26 154 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 SLC47A1Q96FL8 570 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 AURKBQ96GD4 344 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-201ENST00000262395 RHNO1Q9BSD3 238 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ZIM2Q9NZV7 527 aa17.71■□□□□ 0.43
TRAF4-201ENST00000262395 ARVCFO00192 962 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 FGF1P05230 155 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 RPL38P63173 70 aaKnown RBP17.7■□□□□ 0.42
TRAF4-201ENST00000262395 SERINC3Q13530 473 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 CARTPTQ16568 116 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 ZRANB3Q5FWF4 1079 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 PAGE2BQ5JRK9 111 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 RBM48Q5RL73 367 aaKnown RBP17.7■□□□□ 0.42
TRAF4-201ENST00000262395 TEX26Q8N6G2 289 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 OR7D4Q8NG98 312 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 MTRRQ9UBK8 725 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 MYADML2A6NDP7 307 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 C16orf96A6NNT2 1141 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 WASH4PA8MWX3 477 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 CLDN25C9JDP6 229 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 HAS3O00219 553 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 MLYCDO95822 493 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 PFKLP17858 780 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 CD52P31358 61 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 FMO3P31513 532 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
TRAF4-201ENST00000262395 TGFBR1P36897 503 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 VBP1P61758 197 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 TTC23Q5W5X9 447 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 MILR1Q7Z6M3 343 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 BRI3BPQ8WY22 251 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 HDAC2Q92769 488 aaKnown RBP17.7■□□□□ 0.42
TRAF4-201ENST00000262395 SLC39A13Q96H72 371 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 C1orf74Q96LT6 269 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 NODALQ96S42 347 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 SEPT3Q9UH03 358 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 FKBPLQ9UIM3 349 aa17.7■□□□□ 0.42
TRAF4-201ENST00000262395 TRMT6Q9UJA5 497 aaKnown RBP17.7■□□□□ 0.42
TRAF4-201ENST00000262395 TULP3O75386 442 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 TSPAN12O95859 305 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 CHRNA1P02708 482 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 SERPINF2P08697 491 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 HLA-DPA1P20036 260 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 ARPP19P56211 112 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 IL5RAQ01344 420 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 TUBA3CQ13748 450 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 GCNT7Q6ZNI0 430 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 GLMNQ92990 594 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 CNDP2Q96KP4 475 aaKnown RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 ZNF347Q96SE7 839 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 OSBPL10Q9BXB5 764 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 NUSAP1Q9BXS6 441 aaKnown RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 FARSBQ9NSD9 589 aaKnown RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 SMPD4Q9NXE4 827 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 SPATA7Q9P0W8 599 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 NEUROG3Q9Y4Z2 214 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 DICER1Q9UPY3 1922 aaKnown RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 SLC1A7O00341 560 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 FTH1P02794 183 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 OGNP20774 298 aaKnown RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 HMGCS1Q01581 520 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 SIM2Q14190 667 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-201ENST00000262395 CTF1Q16619 201 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 TYSND1Q2T9J0 566 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 FAM174BQ3ZCQ3 159 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 DSG4Q86SJ6 1040 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 KRTCAP2Q8N6L1 136 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 OR4F6Q8NGB9 312 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 TADA1Q96BN2 335 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 POPDC3Q9HBV1 291 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 PCDHGC4Q9Y5F7 938 aa17.69■□□□□ 0.42
TRAF4-201ENST00000262395 LOC100130705A0A1B0GUX0 176 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms