RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Cd209eQ91ZW7 208 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Slc35a5Q921R7 437 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Trim16Q99PP9 556 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Spcs2Q9CYN2 226 aaKnown RBP16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Det1Q9D0A0 550 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mrpl40Q9Z2Q5 206 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 NfkbieO54910 364 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ldb2O55203 373 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Klf10O89091 479 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nr5a2P45448 560 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pdcd5P56812 126 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 SgcdP82347 289 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 1700061G19RikQ08EE8 705 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 CcncQ62447 283 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Usp7Q6A4J8 1103 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pcp4l1Q6W8Q3 68 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr1128Q7TR47 311 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vtcn1Q7TSP5 283 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kctd13Q8BGV7 329 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 MaelQ8BVN9 434 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pcdhb8Q91XZ2 779 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Slc13a3Q91Y63 600 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 CacybpQ9CXW3 229 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tomm70Q9CZW5 611 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pinx1Q9CZX5 332 aaKnown RBP16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tmem80Q9D3H0 123 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Spesp1Q9D5A0 399 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Clcn5Q9WVD4 746 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 PikfyveQ9Z1T6 2097 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Znf106O88466 1888 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gbp4A4UUI3 631 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Sox2P48432 319 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Csrp3P50462 194 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 SobpQ0P5V2 864 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Colec11Q3SXB8 272 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Dpy19l3Q71B07 716 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Chil6Q80W26 440 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fam83eQ80XS7 481 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Msantd1Q8BIL2 278 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Retreg1dQ8VE91 480 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fundc2Q9D6K8 151 aa16■□□□□ 0.15
Trim28-201ENSMUST00000005705 Baz2bA2AUY4 2123 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kiaa0100Q5SYL3 2234 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zfp362B1ASA5 418 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nipsnap3aB1AWZ3 247 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kpna4O35343 521 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cdkn2bP55271 130 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vipr1P97751 459 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cyp2c65Q148B1 490 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Shcbp1lQ3TTP0 639 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kansl1lQ5DTI6 991 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Bcl2l1Q64373 233 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cntn4Q69Z26 1026 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Spata7Q80VP2 582 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Chst2Q80WV3 530 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Piwil2Q8CDG1 971 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 BicralQ8CHH5 1074 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Sbk1Q8QZX0 417 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Akr1c20Q8VC77 323 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Marc2Q922Q1 338 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fcf1Q9CTH6 198 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 OoepQ9CWE6 164 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 EbplQ9D0P0 206 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 IkbkeQ9R0T8 717 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cyp4a29A0A087WPC3 509 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rhox3cA2AWM0 215 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zmynd12A2BGJ5 363 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nsmce4aG3XA30 381 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn2r67K7N6T2 851 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm8011K7N6Y5 207 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rhox3hL7MU37 215 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cyp4a14O35728 507 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 P01652 108 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hoxc11P31313 304 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 S100a9P31725 113 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pdx1P52946 284 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Serpinb5P70124 375 aaKnown RBP15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Psme2P97372 239 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 TceancQ3US16 359 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rhox3aQ4TU90 215 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 GstcdQ5RL51 634 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Svs1Q6WIZ7 820 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mgat5bQ765H6 792 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr412Q7TRW7 312 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zcchc4Q8BKW4 512 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Svs2Q8BS30 375 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Creb5Q8K1L0 357 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Lactb2Q99KR3 288 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cxxc1Q9CWW7 660 aa15.99■□□□□ 0.15
Trim28-201ENSMUST00000005705 Lcn6A2AJB9 181 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Speer4cG3UXD1 256 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm10354K7N6A0 256 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn2r46L7N282 809 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Npy2rP97295 381 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Dnal1Q05A62 190 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 P2rx5Q3UYI1 455 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 NkaplQ5SZT7 395 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 KdsrQ6GV12 332 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mterf2Q8BKY8 385 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Slco2b1Q8BXB6 683 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms