RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TCF3P15923 654 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 AGTR2P50052 363 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PSMD7P51665 324 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 CCR3P51677 355 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ERVPABLB-1P60509 514 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 IL2P60568 153 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 RPS3AP61247 264 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 OCA2Q04671 838 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 MGAT3Q09327 533 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 MAP2K5Q13163 448 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 BFSP2Q13515 415 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 KIAA0040Q15053 153 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
VRK3-209ENST00000594948 MORN1Q5T089 497 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 UGT3A1Q6NUS8 523 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 CYP20A1Q6UW02 462 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 RALGPS2Q86X27 583 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 ZNF548Q8NEK5 533 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 BPIFB6Q8NFQ5 453 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 FBLIM1Q8WUP2 373 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 PARK7Q99497 189 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ACTL8Q9H568 366 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 GALPQ9UBC7 116 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 FAM50BQ9Y247 325 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 C1orf232A0A0U1RR37 186 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 J3QRK9 145 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 MUSKO15146 869 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 SLC16A6O15403 523 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 UGT2B11O75310 529 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 BCAS1O75363 584 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 HTR1AP08908 422 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ALOX5P09917 674 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 RYKP34925 604 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TTPAP49638 278 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 HK3P52790 923 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TPD52P55327 224 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 GNA12Q03113 381 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 RING1Q06587 406 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 TRIM32Q13049 653 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 SELPLGQ14242 412 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ACOX1Q15067 660 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 OXA1LQ15070 435 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PTPRNQ16849 979 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 C5orf22Q49AR2 442 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 RAP1GAP2Q684P5 730 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 CRTC3Q6UUV7 619 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 SLC16A12Q6ZSM3 486 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 NCCRP1Q6ZVX7 275 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 SCN4BQ8IWT1 228 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 FAM126BQ8IXS8 530 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 GLB1L3Q8NCI6 653 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 OR2T12Q8NG77 320 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 DNAJB8Q8NHS0 232 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 BRI3BPQ8WY22 251 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 FBXL8Q96CD0 374 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PDLIM5Q96HC4 596 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 PPP3R2Q96LZ3 170 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 CCDC138Q96M89 665 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 PPM1MQ96MI6 270 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 ACOX2Q99424 681 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 ZBTB18Q99592 522 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 FUNDC2Q9BWH2 189 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 CD274Q9NZQ7 290 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 EIF2B4Q9UI10 523 aaKnown RBP13.06□□□□□ -0.32
VRK3-209ENST00000594948 C3orf18Q9UK00 162 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 V9GYQ6 96 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 BPTFQ12830 3046 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 C2orf81A6NN90 581 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 ENPP3O14638 875 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 LSM1O15116 133 aaKnown RBP13.05□□□□□ -0.32
VRK3-209ENST00000594948 INPPL1O15357 1258 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 CST1P01037 141 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 POMCP01189 267 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 RETP07949 1114 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 IL7RP16871 459 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 NFKBIAP25963 317 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 MAGEA11P43364 429 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 MLLT10P55197 1068 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 MTPNP58546 118 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 BEX3Q00994 111 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 CD47Q08722 323 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
VRK3-209ENST00000594948 ITGADQ13349 1161 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
VRK3-209ENST00000594948 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
VRK3-209ENST00000594948 PLA2G4EQ3MJ16 856 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms