RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 EIF3EP60228 445 aaKnown RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 GTF2H3Q13889 308 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 KCNAB1Q14722 419 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 CACHD1Q5VU97 1274 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 IRGCQ6NXR0 463 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 DUS1LQ6P1R4 473 aaKnown RBP17.72■□□□□ 0.43
CHD3-214ENST00000572579 TMEM139Q8IV31 216 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 GALNT6Q8NCL4 622 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 PPM1MQ96MI6 270 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 TTC25Q96NG3 672 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 FSD1LQ9BXM9 530 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 SLC25A18Q9H1K4 315 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 FAM96AQ9H5X1 160 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHD3-214ENST00000572579 RPS6KL1Q9Y6S9 549 aa17.72■□□□□ 0.43
CHD3-214ENST00000572579 MGAT4DA6NG13 374 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 KCNN4O15554 427 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 PPFIA2O75334 1257 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 RASSF9O75901 435 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 ANXA9O76027 345 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 FURINP09958 794 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 CDKN1CP49918 316 aaPredicted RBP17.71■□□□□ 0.43
CHD3-214ENST00000572579 ZNF140P52738 457 aaPredicted RBP17.71■□□□□ 0.43
CHD3-214ENST00000572579 CDC20Q12834 499 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 ITGA9Q13797 1035 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 MAP7Q14244 749 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 ZNF658BQ4V348 819 aaPredicted RBP17.71■□□□□ 0.43
CHD3-214ENST00000572579 KCTD11Q693B1 232 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 TMTC1Q8IUR5 882 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 RBM12BQ8IXT5 1001 aaKnown RBP17.71■□□□□ 0.43
CHD3-214ENST00000572579 STARD8Q92502 1023 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 SLC41A2Q96JW4 573 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 SPATA13Q96N96 652 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 ULBP3Q9BZM4 244 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 WWP1Q9H0M0 922 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 ASB8Q9H765 288 aa17.71■□□□□ 0.43
CHD3-214ENST00000572579 R3HDM2Q9Y2K5 976 aaKnown RBP17.71■□□□□ 0.43
CHD3-214ENST00000572579 TCRBV7S2A1N4TA0A589 114 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 C5orf60A6NFR6 353 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 LDB2O43679 373 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 SPAG6O75602 509 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 KIAA0754O94854 1291 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 WISP1O95388 367 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 METTL18O95568 372 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 PRSS56P0CW18 603 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 MTHFD1P11586 935 aaKnown RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 VCLP18206 1134 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 RWDD2BP57060 319 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 TMPRSS15P98073 1019 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 IL11RAQ14626 422 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 DARS2Q6PI48 645 aaKnown RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 C6orf15Q6UXA7 325 aaPredicted RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 PTRH1Q86Y79 214 aaKnown RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 OR2L2Q8NH16 312 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 ZDHHC12Q96GR4 267 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 LINC00615Q96LM1 132 aaPredicted RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 MAP3K3Q99759 626 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 FAM117AQ9C073 453 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 ARNT2Q9HBZ2 717 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 CROTQ9UKG9 612 aa17.7■□□□□ 0.42
CHD3-214ENST00000572579 PACSIN2Q9UNF0 486 aaPredicted RBP17.7■□□□□ 0.42
CHD3-214ENST00000572579 COL12A1Q99715 3063 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 MACROD2A1Z1Q3 448 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 CCDC66A2RUB6 948 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 CYSRT1A8MQ03 144 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 DDX3YO15523 660 aaKnown RBP17.69■□□□□ 0.42
CHD3-214ENST00000572579 SFTPCP11686 197 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 MSH3P20585 1137 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 HALP42357 657 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 KCNAB2Q13303 367 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 DEFB109BQ30KR1 87 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 BCL7AQ4VC05 210 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 CCDC181Q5TID7 509 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 ITPRIPL1Q6GPH6 555 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 CAPRIN2Q6IMN6 1127 aaKnown RBP17.69■□□□□ 0.42
CHD3-214ENST00000572579 FBXO38Q6PIJ6 1188 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 TMEM135Q86UB9 458 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 CDKL3Q8IVW4 592 aaPredicted RBP17.69■□□□□ 0.42
CHD3-214ENST00000572579 ESX1Q8N693 406 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 RMDN2Q96LZ7 410 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 RUFY1Q96T51 708 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 ADNPQ9H2P0 1102 aa17.69■□□□□ 0.42
CHD3-214ENST00000572579 TRIT1Q9H3H1 467 aaKnown RBP17.69■□□□□ 0.42
CHD3-214ENST00000572579 IMP3Q9NV31 184 aaKnown RBP17.69■□□□□ 0.42
CHD3-214ENST00000572579 C2orf81A6NN90 581 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 POLBP06746 335 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 TPH1P17752 444 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 AKT1P31749 480 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 TNNT3P45378 269 aaPredicted RBP17.68■□□□□ 0.42
CHD3-214ENST00000572579 CCR10P46092 362 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 VAV2P52735 878 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 GDF10P55107 478 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 KLF1Q13351 362 aaPredicted RBP17.68■□□□□ 0.42
CHD3-214ENST00000572579 LONRF2Q1L5Z9 754 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 PWWP2BQ6NUJ5 590 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 C16orf46Q6P387 395 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 KIAA1143Q96AT1 154 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms