RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 GPR34Q9UPC5 381 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 KCNK6Q9Y257 313 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 PCDHB1Q9Y5F3 818 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 PSAT1Q9Y617 370 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 GOLGA4Q13439 2230 aaKnown RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 A0A087WUV0 522 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 CXorf49A8MYA2 514 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 H3BMM5 538 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 FFAR2O15552 330 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 RIPK2O43353 540 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 C1QAP02745 245 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ESR1P03372 595 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 DGKAP23743 735 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 AK4P27144 223 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 FMO4P31512 558 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ACTR1BP42025 376 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ABCG1P45844 678 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 LEPRP48357 1165 aaKnown RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 ADARP55265 1226 aaKnown RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 ACTR1AP61163 376 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 CTBSQ01459 385 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 BNIP3Q12983 259 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 INAVAQ3KP66 663 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 MAP9Q49MG5 647 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 CNSTQ6PJW8 725 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 SLC30A9Q6PML9 568 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 CYS1Q717R9 158 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 AMZ2Q86W34 360 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 PPM1NQ8N819 430 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 CCL4L1Q8NHW4 92 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 UHMK1Q8TAS1 419 aaKnown RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 LKAAEAR1Q8TD35 194 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 ATXN7L3BQ96GX2 97 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 CYTH2Q99418 400 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 NDNQ99608 321 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ACSS3Q9H6R3 686 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 KLC4Q9NSK0 619 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 UCKL1Q9NWZ5 548 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 DOLKQ9UPQ8 538 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 DNAJC16Q9Y2G8 782 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 PLEKHM1Q9Y4G2 1056 aa11.28□□□□□ -0.6
KARS-207ENST00000566560 ARID1BQ8NFD5 2236 aaPredicted RBP11.28□□□□□ -0.6
KARS-207ENST00000566560 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 IQCF5A8MTL0 148 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 E5RI56 91 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 LMO7DNF2Z398 122 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 PCDHGA12O60330 932 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 NIPSNAP2O75323 286 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 POP7O75817 140 aaKnown RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 HAUS5O94927 633 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 TRIM16O95361 564 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 ANXA6P08133 673 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 GSTM1P09488 218 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 PKMP14618 531 aaKnown RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 ITGB6P18564 788 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 GP5P40197 560 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 GSTM4Q03013 218 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 BOP1Q14137 746 aaKnown RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 NFE2L1Q14494 772 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 TMED2Q15363 201 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 KLHL38Q2WGJ6 581 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 DEFB133Q30KQ1 61 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 UAP1L1Q3KQV9 507 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 SYTL3Q4VX76 610 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 KANSL1Q7Z3B3 1105 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 NRROSQ86YC3 692 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 KRT222Q8N1A0 295 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 SDR16C5Q8N3Y7 309 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 GPATCH11Q8N954 259 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 GPBAR1Q8TDU6 330 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 ELMO1Q92556 727 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 CAVIN3Q969G5 261 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 BIRC8Q96P09 236 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 CPNE1Q99829 537 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 CCM2Q9BSQ5 444 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 TAAR2Q9P1P5 351 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 SLC23A2Q9UGH3 650 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 CORO1CQ9ULV4 474 aaPredicted RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 PCDHGB2Q9Y5G2 931 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 DNMT3AQ9Y6K1 912 aaPredicted RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 CSNK1G3Q9Y6M4 447 aa11.27□□□□□ -0.61
KARS-207ENST00000566560 PTPRZ1P23471 2315 aaPredicted RBP11.27□□□□□ -0.61
KARS-207ENST00000566560 BPTFQ12830 3046 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms