RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SOCS6O14544 535 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 ADAM10O14672 748 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 ZNF749O43361 778 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 NUAK1O60285 661 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 PRAMEF11O60813 436 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 PMPCBO75439 489 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 PALMO75781 387 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 MTA2O94776 668 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 PYGLP06737 847 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 CTPS1P17812 591 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 YBEYP58557 167 aaPredicted RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 ATP11AP98196 1134 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 INSCQ1MX18 579 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 KLHL35Q6PF15 583 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 CRTC3Q6UUV7 619 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 GPR150Q8NGU9 434 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 MCCC1Q96RQ3 725 aaPredicted RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 CINPQ9BW66 212 aaPredicted RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 ARFGAP3Q9NP61 516 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 SAMSN1Q9NSI8 373 aaKnown RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 STMN3Q9NZ72 180 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 IFT80Q9P2H3 777 aaPredicted RBP9.12□□□□□ -0.95
NEDD1-211ENST00000557454 TRIM10Q9UDY6 481 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 NDOR1Q9UHB4 597 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 EDARQ9UNE0 448 aa9.12□□□□□ -0.95
NEDD1-211ENST00000557454 OR5K3A6NET4 321 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 E7EQ34 232 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 E9PLN8 166 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 FAM227AF5H4B4 570 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 KCNAB3O43448 404 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 GADD45BO75293 160 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 TOXO94900 526 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ATE1O95260 518 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ZNF30P17039 623 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ZNF8P17098 575 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 EPHB2P29323 1055 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 KPNA2P52292 529 aaKnown RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 AP1S1P61966 158 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 CDO1Q16878 200 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ZNF648Q5T619 568 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 C16orf47Q6ZP98 133 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 SIMC1Q8NDZ2 872 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 GPR137Q96N19 417 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 SMIM14Q96QK8 99 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 TSPAN10Q9H1Z9 355 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 CARD9Q9H257 536 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 PLCB1Q9NQ66 1216 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ATXN10Q9UBB4 475 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
NEDD1-211ENST00000557454 TRPS1Q9UHF7 1281 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 CDC23Q9UJX2 597 aa9.11□□□□□ -0.95
NEDD1-211ENST00000557454 SLC9B1P1A6NJY1 282 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 FADS2P1A8MWK0 482 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 GOLGA8SH3BPF8 625 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 CRLF1O75462 422 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 RAF1P04049 648 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 TPOP07202 933 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 HBQ1P09105 142 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 ABOP16442 354 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 MMP11P24347 488 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 PREPP48147 710 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 SNX16P57768 344 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 GUCA2AQ02747 115 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 PTSQ03393 145 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 TRAF2Q12933 501 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 HMBOX1Q6NT76 420 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
NEDD1-211ENST00000557454 ABRAXAS1Q6UWZ7 409 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 USP45Q70EL2 814 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 CDC20BQ86Y33 519 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 DOLPP1Q86YN1 238 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 ZZZ3Q8IYH5 903 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
NEDD1-211ENST00000557454 UMODL1-AS1Q8N2C9 162 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 PYROXD2Q8N2H3 581 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 CCDC185Q8N715 623 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 THAP3Q8WTV1 239 aaPredicted RBP9.1□□□□□ -0.95
NEDD1-211ENST00000557454 SCRN2Q96FV2 425 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 CELF6Q96J87 481 aaKnown RBP9.1□□□□□ -0.95
NEDD1-211ENST00000557454 OR2AG1Q9H205 316 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 RASSF1Q9NS23 344 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 HRASLS2Q9NWW9 162 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 PCDHGC3Q9UN70 934 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 WDR37Q9Y2I8 494 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 HS3ST3B1Q9Y662 390 aa9.1□□□□□ -0.95
NEDD1-211ENST00000557454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 BECN2A8MW95 431 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 SOCS5O75159 536 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms