RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PATE1Q8WXA2 126 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 CDKL2Q92772 493 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 FGF11Q92914 225 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 GLYATL1Q969I3 302 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF578Q96N58 590 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 VPS35Q96QK1 796 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 WDR83Q9BRX9 315 aaKnown RBP9.49□□□□□ -0.89
ACTN1-215ENST00000555616 LRRC4CQ9HCJ2 640 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 SATB2Q9UPW6 733 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 PLEKHM1Q9Y4G2 1056 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ARL5AQ9Y689 179 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 FAM169AQ9Y6X4 670 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 LAMA5O15230 3695 aa9.49□□□□□ -0.89
ACTN1-215ENST00000555616 ASXL3Q9C0F0 2248 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 SCN8AQ9UQD0 1980 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CCDC187A0A096LP49 1063 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TCRBV9S1A1TA0A576 114 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CCDC78A2IDD5 438 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PMS2P1A4D2B8 440 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TMX2-CTNND1H3BSU7 103 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CHUKO15111 745 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 NUAK1O60285 661 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ASMTLO95671 621 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 NUDT17P0C025 328 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF8P17098 575 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 NMBRP28336 390 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 GPR3P46089 330 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 FASLGP48023 281 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CLCNKAP51800 687 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF140P52738 457 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 INHBCP55103 352 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 EIF3BP55884 814 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PCBP4P57723 403 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PRAMEP78395 509 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 B4GALNT1Q00973 533 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 MGAT5Q09328 741 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 EIF3IQ13347 325 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 THOC5Q13769 683 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 LONRF1Q17RB8 773 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 KLHL38Q2WGJ6 581 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 C3orf38Q5JPI3 329 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ZDHHC20Q5W0Z9 365 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF449Q6P9G9 518 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CYS1Q717R9 158 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ADGRG6Q86SQ4 1221 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 SLITRK4Q8IW52 837 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 SFRP1Q8N474 314 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 Q8N9G6 341 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 WDR36Q8NI36 951 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 SLC37A2Q8TED4 501 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 MFSD3Q96ES6 412 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CERS2Q96G23 380 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PRR11Q96HE9 360 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TMEM74Q96NL1 305 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 RUFY1Q96T51 708 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 CYTH2Q99418 400 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ACSS3Q9H6R3 686 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TRIM39Q9HCM9 518 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 IL26Q9NPH9 171 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PPANQ9NQ55 473 aaKnown RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 THSD1Q9NS62 852 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TREX1Q9NSU2 369 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 C20orf96Q9NUD7 363 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 NLE1Q9NVX2 485 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-215ENST00000555616 SMOXQ9NWM0 555 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 IL17CQ9P0M4 197 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ATXN10Q9UBB4 475 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 ZNHIT2Q9UHR6 403 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 PRKAB1Q9Y478 270 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 KNTC1P50748 2209 aa9.48□□□□□ -0.89
ACTN1-215ENST00000555616 MYLKQ15746 1914 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 BPTFQ12830 3046 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ZCWPW2A0A1B0GU75 182 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 EXOC1LA0A1B0GW35 172 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 RHPN2P1A8MT19 583 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 GAPDHSO14556 408 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 GRID2O43424 1007 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 BUD23O43709 281 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 VEGFDO43915 354 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 SLC25A14O95258 325 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 VAPBO95292 243 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CPNE6O95741 557 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 EML2O95834 649 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ITGA2BP08514 1039 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ACP5P13686 325 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 SPAM1P38567 509 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ABCG1P45844 678 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 GPX6P59796 221 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ACVR1Q04771 509 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 GPS2Q13227 327 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 NAB1Q13506 487 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 UAP1Q16222 522 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 COL28A1Q2UY09 1125 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ATP13A5Q4VNC0 1218 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms