RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CNTN5O94779 1100 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 SLITRK5O94991 958 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PRSS23O95084 383 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 SLC35E2BP0CK96 405 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 NCK1P16333 377 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 NFKB1P19838 968 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 GPX3P22352 226 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 UGT2B10P36537 528 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PRIM2P49643 509 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 GSK3BP49841 420 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 ISL1P61371 349 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 FOXM1Q08050 763 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 DGCR6Q14129 220 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 CLCA4Q14CN2 919 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PARP15Q460N3 678 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 CENPLQ8N0S6 344 aaPredicted RBP15.46■□□□□ 0.07
SYNE3-203ENST00000554873 RPL3LQ92901 407 aaKnown RBP15.46■□□□□ 0.07
SYNE3-203ENST00000554873 DUSP16Q9BY84 665 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 AMBRA1Q9C0C7 1298 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 LTB4R2Q9NPC1 389 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 EHD3Q9NZN3 535 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 BTBD3Q9Y2F9 522 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 HCN4Q9Y3Q4 1203 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PCDHA9Q9Y5H5 950 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PCM1Q15154 2024 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PDHXO00330 501 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 SLC4A1P02730 911 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 AHSGP02765 367 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 RBP1P09455 135 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 HNRNPLP14866 589 aaKnown RBP eCLIP15.46■□□□□ 0.072e-7■■■■□ 26
SYNE3-203ENST00000554873 MAP2K4P45985 399 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 HCAR3P49019 387 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 B2MP61769 119 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.07
SYNE3-203ENST00000554873 TSTD2Q5T7W7 516 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 SLC27A1Q6PCB7 646 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 PDZD4Q76G19 769 aaPredicted RBP15.46■□□□□ 0.07
SYNE3-203ENST00000554873 CACTIN-AS1Q8N1I8 211 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 LRRC58Q96CX6 371 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 OSBPL2Q9H1P3 480 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 KCNN2Q9H2S1 579 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 NXF3Q9H4D5 531 aaKnown RBP15.46■□□□□ 0.07
SYNE3-203ENST00000554873 ALG2Q9H553 416 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 CDHR5Q9HBB8 845 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 TIGARQ9NQ88 270 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 CSADQ9Y600 493 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 A0A0G2JLL6 359 aaPredicted RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ERI2A8K979 691 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 BET1O15155 118 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 OR7A10O76100 309 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 RECQL4O94761 1208 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 EPN2O95208 641 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 CFL1P23528 166 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 FSHRP23945 695 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 TGFBR1P36897 503 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PIGAP37287 484 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 RABGGTBP53611 331 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PLEKHG6Q3KR16 790 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 TOR2AQ5JU69 321 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 TAPT1Q6NXT6 567 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ARMCX2Q7L311 632 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PRRT2Q7Z6L0 340 aaPredicted RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 IFNEQ86WN2 208 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 RAB43Q86YS6 212 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 SLC41A1Q8IVJ1 513 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 RIMKLAQ8IXN7 391 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 SPATA6LQ8N4H0 392 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 LRRC20Q8TCA0 184 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 OMDQ99983 421 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 RHOJQ9H4E5 214 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 KLK14Q9P0G3 267 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 MKLN1Q9UL63 735 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PCDHGA10Q9Y5H3 936 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 MAGED1Q9Y5V3 778 aaPredicted RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 CLDN24A6NM45 220 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 LEUTXA8MZ59 168 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 H3BRB1 525 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PLK4O00444 970 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 CPNE3O75131 537 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 GOT2P00505 430 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 UQCRC1P31930 480 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 SEMA3BQ13214 749 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF460Q14592 562 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 VPS26BQ4G0F5 336 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 PAQR9Q6ZVX9 377 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ZDHHC13Q8IUH4 622 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 SLC2A13Q96QE2 648 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ZSCAN5AQ9BUG6 496 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 MRM3Q9HC36 420 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ZNF304Q9HCX3 659 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 UCKL1Q9NWZ5 548 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ERVK-18Q9QC07 812 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 UBQLN1Q9UMX0 589 aaKnown RBP15.45■□□□□ 0.06
SYNE3-203ENST00000554873 V9GYQ6 96 aa15.45■□□□□ 0.06
SYNE3-203ENST00000554873 ITGA2P17301 1181 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 CD6P30203 668 aa15.44■□□□□ 0.06
SYNE3-203ENST00000554873 DNAJB13P59910 316 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms