RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 AGAP9Q5VTM2 703 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 ZNF438Q7Z4V0 828 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 SFTPA2Q8IWL1 248 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 MPP5Q8N3R9 675 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 OR2L2Q8NH16 312 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 PATE1Q8WXA2 126 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 MFSD3Q96ES6 412 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 SNF8Q96H20 258 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 PRDM8Q9NQV8 689 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 CLCA2Q9UQC9 943 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 SPTA1P02549 2419 aa17.02■□□□□ 0.32
CDK4-208ENST00000551706 ATMQ13315 3056 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 C17orf113A0A1B0GUU1 675 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 EFCAB8A8MWE9 144 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 TLX3O43711 291 aaPredicted RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 SGTAO43765 313 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 EML2O95834 649 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 HALP42357 657 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 TTPAP49638 278 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 NR1D2Q14995 579 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 WHAMMP3Q1A5X7 153 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 DNAJC21Q5F1R6 531 aaKnown RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 KIAA0930Q6ICG6 404 aaPredicted RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 SLC9B2Q86UD5 537 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 LURAP1LQ8IV03 231 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 CCNJLQ8IV13 435 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 BEND7Q8N7W2 519 aaPredicted RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 BBOF1Q8ND07 529 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 ZNF592Q92610 1267 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 DEPDC7Q96QD5 511 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 TRIM51Q9BSJ1 452 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 SARS2Q9NP81 518 aaKnown RBP17.01■□□□□ 0.31
CDK4-208ENST00000551706 ACSL5Q9ULC5 683 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 MYLKQ15746 1914 aa17.01■□□□□ 0.31
CDK4-208ENST00000551706 MGAQ8IWI9 3026 aa17■□□□□ 0.31
CDK4-208ENST00000551706 PFDN6O15212 129 aa17■□□□□ 0.31
CDK4-208ENST00000551706 CD3EAPO15446 510 aaKnown RBP17■□□□□ 0.31
CDK4-208ENST00000551706 SEC31AO94979 1220 aaKnown RBP17■□□□□ 0.31
CDK4-208ENST00000551706 MT-CO3P00414 261 aa17■□□□□ 0.31
CDK4-208ENST00000551706 PBLDP30039 288 aaPredicted RBP17■□□□□ 0.31
CDK4-208ENST00000551706 HHEXQ03014 270 aa17■□□□□ 0.31
CDK4-208ENST00000551706 C2orf54Q08AI8 447 aa17■□□□□ 0.31
CDK4-208ENST00000551706 SPIDRQ14159 915 aa17■□□□□ 0.31
CDK4-208ENST00000551706 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
CDK4-208ENST00000551706 METRNLQ641Q3 311 aa17■□□□□ 0.31
CDK4-208ENST00000551706 MRNIPQ6NTE8 343 aa17■□□□□ 0.31
CDK4-208ENST00000551706 PCSK4Q6UW60 755 aa17■□□□□ 0.31
CDK4-208ENST00000551706 SPRED1Q7Z699 444 aa17■□□□□ 0.31
CDK4-208ENST00000551706 SDCCAG8Q86SQ7 713 aaPredicted RBP17■□□□□ 0.31
CDK4-208ENST00000551706 TMEM135Q86UB9 458 aa17■□□□□ 0.31
CDK4-208ENST00000551706 PDIK1LQ8N165 341 aa17■□□□□ 0.31
CDK4-208ENST00000551706 DCBLD1Q8N8Z6 715 aa17■□□□□ 0.31
CDK4-208ENST00000551706 HM13Q8TCT9 377 aa17■□□□□ 0.31
CDK4-208ENST00000551706 GRAMD1AQ96CP6 724 aa17■□□□□ 0.31
CDK4-208ENST00000551706 NAT9Q9BTE0 207 aa17■□□□□ 0.31
CDK4-208ENST00000551706 LDHAL6BQ9BYZ2 381 aaPredicted RBP17■□□□□ 0.31
CDK4-208ENST00000551706 LRRN3Q9H3W5 708 aa17■□□□□ 0.31
CDK4-208ENST00000551706 CPNE7Q9UBL6 633 aa17■□□□□ 0.31
CDK4-208ENST00000551706 RABGEF1Q9UJ41 708 aa17■□□□□ 0.31
CDK4-208ENST00000551706 MAD1L1Q9Y6D9 718 aa17■□□□□ 0.31
CDK4-208ENST00000551706 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
CDK4-208ENST00000551706 KNTC1P50748 2209 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 TRBV23OR9-2A0A075B6M9 112 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 NTN3O00634 580 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 USP1O94782 785 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 VAPBO95292 243 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 OR56A5P0C7T3 313 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 XRCC1P18887 633 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 RPL10P27635 214 aaKnown RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 NFE2L1Q14494 772 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 SEPT7Q16181 437 aaKnown RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 CLPPQ16740 277 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 ANKRD20A4Q4UJ75 823 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 HIBCHQ6NVY1 386 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 ZNF449Q6P9G9 518 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 CES3Q6UWW8 571 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 RBM44Q6ZP01 1051 aaKnown RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 CLDN19Q8N6F1 224 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 OTUD6BQ8N6M0 293 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 KIF18AQ8NI77 898 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 ZNF669Q96BR6 464 aaPredicted RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 SIGLEC10Q96LC7 697 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 GFM1Q96RP9 751 aaKnown RBP16.99■□□□□ 0.31
CDK4-208ENST00000551706 SLC38A3Q99624 504 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 CCM2Q9BSQ5 444 aa16.99■□□□□ 0.31
CDK4-208ENST00000551706 PPM1DO15297 605 aa16.98■□□□□ 0.31
CDK4-208ENST00000551706 RAD51CO43502 376 aa16.98■□□□□ 0.31
CDK4-208ENST00000551706 TTC4O95801 387 aa16.98■□□□□ 0.31
CDK4-208ENST00000551706 VIPP01282 170 aa16.98■□□□□ 0.31
CDK4-208ENST00000551706 FTH1P02794 183 aa16.98■□□□□ 0.31
CDK4-208ENST00000551706 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
CDK4-208ENST00000551706 POLBP06746 335 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms