RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IRX6P78412 446 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MPP1Q00013 466 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PSG6Q00889 435 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CFHR3Q02985 330 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 YWHAHQ04917 246 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 GOLGA8FQ08AF8 430 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TBL3Q12788 808 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SMARCB1Q12824 385 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SLC14A1Q13336 389 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 EIF4EBP2Q13542 120 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MTF1Q14872 753 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MFSD13AQ14CX5 517 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PDGFRLQ15198 375 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 GPR68Q15743 365 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CNGA3Q16281 694 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CYP4A22Q5TCH4 519 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 FNDC7Q5VTL7 733 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NAA35Q5VZE5 725 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 JADE1Q6IE81 842 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ANO7Q6IWH7 933 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF280DQ6N043 979 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 C16orf89Q6UX73 402 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 DSTYKQ6XUX3 929 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CENPQQ7L2Z9 268 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SLC29A4Q7RTT9 530 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SPRED1Q7Z699 444 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 HEATR4Q86WZ0 1026 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ARL14EPQ8N8R7 260 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 MAB21L3Q8N8X9 362 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TERB1Q8NA31 727 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PCYOX1LQ8NBM8 494 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ADPRHL1Q8NDY3 354 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 DEFB124Q8NES8 71 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 APPL2Q8NEU8 664 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 OR5B17Q8NGF7 314 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 RPLP0P6Q8NHW5 317 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SLC2A12Q8TD20 617 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NOC3LQ8WTT2 800 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 C2orf15Q8WU43 125 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 LINC00476Q8WZB0 136 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 DAZAP1Q96EP5 407 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PRR11Q96HE9 360 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PIWIL1Q96J94 861 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 HIC2Q96JB3 615 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SPATA17Q96L03 361 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CEP295NLQ96MC4 621 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SNX18Q96RF0 628 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 P2RY13Q9BPV8 354 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 EDEM2Q9BV94 578 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ELOVL1Q9BW60 279 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ADGRE3Q9BY15 652 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SEMA4CQ9C0C4 833 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CDCP1Q9H5V8 836 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ASB7Q9H672 318 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM206Q9H813 350 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 RMI1Q9H9A7 625 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 CSNK1G1Q9HCP0 422 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ASAH2Q9NR71 780 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 PDRG1Q9NUG6 133 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ABHD10Q9NUJ1 306 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 DDX19AQ9NUU7 478 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SYBUQ9NX95 663 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 WSB2Q9NYS7 404 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 GTF3C4Q9UKN8 822 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 FZD4Q9ULV1 537 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 UBQLN1Q9UMX0 589 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 BTBD3Q9Y2F9 522 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 RAI2Q9Y5P3 530 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 HEMK1Q9Y5R4 338 aaPredicted RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 WNT6Q9Y6F9 365 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 U3KQA8 63 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 TEP1Q99973 2627 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 HELZP42694 1942 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NBASA2RRP1 2371 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 NF1P21359 2839 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SCN1AP35498 2009 aa2.44□□□□□ -2.02
CPSF6-207ENST00000551516 SPTAN1Q13813 2472 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
CPSF6-207ENST00000551516 ARID2Q68CP9 1835 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 TNRC6BQ9UPQ9 1833 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ZFHX3Q15911 3703 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 A0A1W2PR77 199 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MYMKA6NI61 221 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KPNA7A9QM74 516 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 WASH3PC4AMC7 463 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PEX12O00623 359 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PRRG1O14668 218 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 KLK10O43240 276 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 COCHO43405 550 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CACNG3O60359 315 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 EXOC3O60645 756 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 PRAMEF2O60811 474 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 GCATO75600 419 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 HEXIM1O94992 359 aaKnown RBP2.43□□□□□ -2.02
CPSF6-207ENST00000551516 FGF19O95750 216 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 MT-CO3P00414 261 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 WNT1P04628 370 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 CSF1P09603 554 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ELFN1P0C7U0 828 aa2.43□□□□□ -2.02
CPSF6-207ENST00000551516 ATP1A3P13637 1013 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms