RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FAM126BQ8IXS8 530 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ABHD8Q96I13 439 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 UROC1Q96N76 676 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ALPK1Q96QP1 1244 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 TRIB3Q96RU7 358 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 NUDT4Q9NZJ9 180 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 WARS2Q9UGM6 360 aaKnown RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 ST3GAL5Q9UNP4 418 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 NEUROG3Q9Y4Z2 214 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 COMMD10Q9Y6G5 202 aa8.64□□□□□ -1.03
TDP1-204ENST00000545686 ZNF106Q9H2Y7 1883 aaKnown RBP8.64□□□□□ -1.03
TDP1-204ENST00000545686 DRGXA6NNA5 263 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SLC1A7O00341 560 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ANKRD28O15084 1053 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 B3GAT3O94766 335 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SCELO95171 688 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 TSPAN12O95859 305 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 MSH3P20585 1137 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PCMT1P22061 227 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 NFKBIAP25963 317 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 HTR1BP28222 390 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 FMO4P31512 558 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 RYKP34925 604 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 AGTR2P50052 363 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 MAPK10P53779 464 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 MTPNP58546 118 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 AQP6Q13520 282 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SELPLGQ14242 412 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CTF1Q16619 201 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CYP2A13Q16696 494 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ZNF691Q5VV52 312 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 IL31Q6EBC2 164 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 UGT3A1Q6NUS8 523 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CYP20A1Q6UW02 462 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CD300LGQ6UXG3 332 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 Q6ZSR9 355 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 RALGPS2Q86X27 583 aaPredicted RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 GPSM1Q86YR5 675 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ZNF548Q8NEK5 533 aaPredicted RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 OR2T12Q8NG77 320 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 NPLOC4Q8TAT6 608 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 LPPQ93052 612 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PPM1MQ96MI6 270 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ZNF583Q96ND8 569 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 NODALQ96S42 347 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 GPR21Q99679 349 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SH3GL1Q99961 368 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 AMBRA1Q9C0C7 1298 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 FBXO44Q9H4M3 255 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ACTL8Q9H568 366 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 NECTIN3Q9NQS3 549 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 DAPK2Q9UIK4 370 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 TRMT6Q9UJA5 497 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 FAM50BQ9Y247 325 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PLXNA4Q9HCM2 1894 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 KRBA1A5PL33 1030 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 LSM1O15116 133 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 SLC16A6O15403 523 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CNOT3O75175 753 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 OR4F21O95013 312 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CST1P01037 141 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 RETP07949 1114 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ITGAMP11215 1152 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 BRCC3P46736 316 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SERPINB10P48595 397 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CD47Q08722 323 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 KCNAB2Q13303 367 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 GALNT3Q14435 633 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PTPRCAPQ14761 206 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CTU2Q2VPK5 515 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 RNF165Q6ZSG1 346 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ADHFE1Q8IWW8 467 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 EID3Q8N140 333 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 CARNMT1Q8N4J0 409 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 OR5K1Q8NHB7 308 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SLC35B4Q969S0 331 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SLC47A1Q96FL8 570 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 ACOX2Q99424 681 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 C17orf80Q9BSJ5 609 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PIF1Q9H611 641 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 PDFQ9HBH1 243 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 FBXO8Q9NRD0 319 aa8.63□□□□□ -1.03
TDP1-204ENST00000545686 EIF2B4Q9UI10 523 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 MRPL42Q9Y6G3 142 aaKnown RBP8.63□□□□□ -1.03
TDP1-204ENST00000545686 LOC100130705A0A1B0GUX0 176 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 TRIM43BA6NCK2 446 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ZNF99A8MXY4 864 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 M0QX08 132 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 GSTA4O15217 222 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ZNF623O75123 536 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 NDUFS2O75306 463 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 DDNO94850 711 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 NTRK1P04629 796 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PKMP14618 531 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 GRK3P35626 688 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 SOX11P35716 441 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms