RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PROCRQ9UNN8 238 aa5.78□□□□□ -1.48
CPNE3-206ENST00000523469 RGPD2P0DJD1 1756 aa5.78□□□□□ -1.48
CPNE3-206ENST00000523469 DLEC1Q9Y238 1755 aa5.78□□□□□ -1.48
CPNE3-206ENST00000523469 PASKQ96RG2 1323 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 KDM6AO15550 1401 aaPredicted RBP5.77□□□□□ -1.49
CPNE3-206ENST00000523469 PRSS44E7EML9 344 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 TULP2O00295 520 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 KCNN4O15554 427 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 OR2C1O95371 312 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 HIST1H2ABP04908 130 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 ACTN1P12814 892 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 HIST1H2ADP20671 130 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 CORO1AP31146 461 aaKnown RBP5.77□□□□□ -1.49
CPNE3-206ENST00000523469 USP8P40818 1118 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 APOBEC1P41238 236 aaKnown RBP5.77□□□□□ -1.49
CPNE3-206ENST00000523469 ERVFC1-1P60608 527 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 KLHL22Q53GT1 634 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 PMS2CLQ68D20 193 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 GFRALQ6UXV0 394 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 HIST3H2AQ7L7L0 130 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 GPR180Q86V85 440 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 ODF3L1Q8IXM7 274 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 TEX11Q8IYF3 940 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 C1orf87Q8N0U7 546 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 NAGSQ8N159 534 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 TTC39CQ8N584 583 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 OR8K5Q8NH50 307 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 THAP6Q8TBB0 222 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 LNX1Q8TBB1 728 aaPredicted RBP5.77□□□□□ -1.49
CPNE3-206ENST00000523469 SLC20A1Q8WUM9 679 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 DNAAF4Q8WXU2 420 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 SORCS1Q8WY21 1168 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 CDCA5Q96FF9 252 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 PGAM5Q96HS1 289 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 EGLN2Q96KS0 407 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 KRTAP1-5Q9BYS1 174 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 FTOQ9C0B1 505 aaKnown RBP eCLIP5.77□□□□□ -1.49
CPNE3-206ENST00000523469 PIGMQ9H3S5 423 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 RETREG1Q9H6L5 497 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 MTMR10Q9NXD2 777 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 FBXL2Q9UKC9 423 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 CACNA1SQ13698 1873 aa5.77□□□□□ -1.49
CPNE3-206ENST00000523469 AP3D1O14617 1153 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 CAMTA2O94983 1202 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 ICAM1P05362 532 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 UGT1A1P22309 533 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 HOXA13P31271 388 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 GNL1P36915 607 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 CDH8P55286 799 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 RELQ04864 619 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PDE1CQ14123 709 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 ASTE1Q2TB18 679 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 C18orf63Q68DL7 685 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 WBP2NLQ6ICG8 309 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PAPD4Q6PIY7 484 aaKnown RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 CHST9Q7L1S5 443 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 SDCCAG8Q86SQ7 713 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-206ENST00000523469 EXOC3L1Q86VI1 746 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 TMEM219Q86XT9 240 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 HMGCLL1Q8TB92 370 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 SECTM1Q8WVN6 248 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PIGTQ969N2 578 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 ELMOD3Q96FG2 381 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 CAPNS2Q96L46 248 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 DOCK7Q96N67 2140 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 OR2A14Q96R47 310 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 SETD4Q9NVD3 440 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PNMA2Q9UL42 364 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PADI3Q9ULW8 664 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 KLHL20Q9Y2M5 609 aa5.76□□□□□ -1.49
CPNE3-206ENST00000523469 PTPRCP08575 1304 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 EIF4E1BA6NMX2 242 aaKnown RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 KRTAP29-1A8MX34 341 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 PRAC2D3DTV9 90 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 PTGES3LE9PB15 166 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 H3BQ06 376 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 HS6ST1O60243 411 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 DOK2O60496 412 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 SRPRAP08240 638 aaKnown RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 ACADLP28330 430 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 CLDN20P56880 219 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 TMF1P82094 1093 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 SREBF2Q12772 1141 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 CDC16Q13042 620 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 AIMP2Q13155 320 aaKnown RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 LCN10Q6JVE6 187 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 KMT5CQ86Y97 462 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 ADGRF2Q8IZF7 708 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 RFLNBQ8N5W9 214 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 HJURPQ8NCD3 748 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-206ENST00000523469 ACVR1CQ8NER5 493 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 OR5R1Q8NH85 324 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 HM13Q8TCT9 377 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 TRPC4APQ8TEL6 797 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 PCYT2Q99447 389 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 TMEM39BQ9GZU3 492 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 SYNCQ9H7C4 482 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 EVA1AQ9H8M9 152 aa5.75□□□□□ -1.49
CPNE3-206ENST00000523469 EPB41L5Q9HCM4 733 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms