RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SCNN1BP51168 640 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NEK3P51956 506 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF140P52738 457 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ECT2LQ008S8 904 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ATCAYQ86WG3 371 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TRIM69Q86WT6 500 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TMEM145Q8NBT3 493 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 C2CD4AQ8NCU7 369 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF548Q8NEK5 533 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 OR13J1Q8NGT2 312 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 PIH1D2Q8WWB5 315 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 MIB2Q96AX9 1013 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 APOPT1Q96IL0 206 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NSMCE3Q96MG7 304 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TCF12Q99081 682 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 GPR22Q99680 433 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 APOL2Q9BQE5 337 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 CCDC3Q9BQI4 270 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF768Q9H5H4 540 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ATP13A3Q9H7F0 1226 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 INTS9Q9NV88 658 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NLE1Q9NVX2 485 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NKIRAS1Q9NYS0 192 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TBK1Q9UHD2 729 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC25A13Q9UJS0 675 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 SARDHQ9UL12 918 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 PCDHB11Q9Y5F2 797 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TRIM49D1C9J1S8 452 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 POP4O95707 220 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 MT-CO1P00395 513 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 GSTA1P08263 222 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 RNF224P0DH78 156 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 COL6A2P12110 1019 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 CHN1P15882 459 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 TPH1P17752 444 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 KRT4P19013 534 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 ELAVL4P26378 380 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 SERPINA4P29622 427 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 ETV4P43268 484 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 LEPRP48357 1165 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 GYS2P54840 703 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 MLLT10P55197 1068 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 HNRNPKP61978 463 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 CNTN1Q12860 1018 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 TRAF2Q12933 501 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 MPP2Q14168 576 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 POU6F1Q14863 301 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 CNGA3Q16281 694 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 FHL5Q5TD97 284 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 ESRP1Q6NXG1 681 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 C22orf39Q6P5X5 142 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 LINGO4Q6UY18 593 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 PTAR1Q7Z6K3 402 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 ZC3HC1Q86WB0 502 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC22A18ASQ8N1D0 253 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 LMX1AQ8TE12 382 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 SSC4DQ8WTU2 575 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF778Q96MU6 729 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 MCCC1Q96RQ3 725 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 TRIM56Q9BRZ2 755 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC12A9Q9BXP2 914 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 VPS11Q9H270 941 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 C20orf96Q9NUD7 363 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 FOXJ2Q9P0K8 574 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 TXNDC16Q9P2K2 825 aa10.36□□□□□ -0.75
PDLIM5-217ENST00000512274 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 A0A1W2PPM1 405 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 A0A1W2PQU0 124 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CCDC189A1A4V9 331 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 C2orf81A6NN90 581 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 K7ERQ8 282 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 KLF11O14901 512 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 AQP9O43315 295 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 SMAD6O43541 496 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 VAPBO95292 243 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ALDOAP04075 364 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ERVK-10P10266 1014 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 AKT2P31751 481 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 HMGCLP35914 325 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 SLC26A3P40879 764 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CCT5P48643 541 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 SERPINB8P50452 374 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 MAPK10P53779 464 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ADARP55265 1226 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 GNGT1P63211 74 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 RAD51Q06609 339 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 BCL2L1Q07817 233 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 C1orf61Q13536 156 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 ZKSCAN8Q15776 578 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 PCSK7Q16549 785 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 QPCTQ16769 361 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 TYSND1Q2T9J0 566 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 MYLK3Q32MK0 819 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 HSP90AA5PQ58FG0 334 aa10.35□□□□□ -0.75
PDLIM5-217ENST00000512274 CARD16Q5EG05 197 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms